Pseudonocardia autotrophica: Pdca_60540
Help
Entry
Pdca_60540 CDS
T06156
Symbol
hemD
Name
(GenBank) bifunctional uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
paut
Pseudonocardia autotrophica
Pathway
paut00860
Porphyrin metabolism
paut01100
Metabolic pathways
paut01110
Biosynthesis of secondary metabolites
paut01120
Microbial metabolism in diverse environments
paut01240
Biosynthesis of cofactors
Module
paut_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
paut_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Pdca_60540 (hemD)
Enzymes [BR:
paut01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
Pdca_60540 (hemD)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
Pdca_60540 (hemD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEM4
TP_methylase
B12-binding
Motif
Other DBs
NCBI-ProteinID:
BBG04845
LinkDB
All DBs
Position
complement(6430514..6432055)
Genome browser
AA seq
513 aa
AA seq
DB search
MTGPANTSGRIAFVGSGPGDPALLTVRARDVLAGSPLVITDPDVPEGILALAADGAEVRP
AVGQPADIASDLLAEAGQGRSVARLVSGDPLTNDAVVAEALAVSASGTAFDVVPGVPAST
AVPAYAGVALGSAHVEADVRAGVDWAALAASPGPVVLHATSALLADVASGLSAQGVPAET
AVAITAGGTTSTQRTISSSIGKLAGDGSDLEGALVLTVGDAAGRRGELSWWESRALYGWR
VLVPRTKDQAGVMSERLRMHGAIPEEVPTIAVEPPRSPAQMERSVKGLVDGRYQWVVFTS
TNAVKAVWEKFAEFGLDARAFSGVKIACVGRSTAEKVREFGIEPELVPDIDEAQSSTSEG
LLEIFPPYDDVLDPVDRVLLPRADIATETLSAGLQERGWEVDDVTAYRTVRAAPPPAPIR
EAIKTGGFDAVCFTSSSTVRNLVGIAGKPHARTLVACIGPATAETAREFGLRVDVQPEEA
RVPSLVDALASHTAKLRAEGNLPPPKKVKARRR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgacaggacctgccaacacctcggggcggatcgccttcgtgggcagcggaccgggggac
ccggcgctgctcaccgtgcgcgccagggatgttctcgccggctcgccgctggtgatcacg
gacccggacgtaccggagggcatcctcgcgctcgccgccgacggcgccgaggtgcgcccg
gcggtcggccagcccgccgacatcgcgagtgacctgctggcggaggccggccagggccgt
tcggtggcccggctggtctccggtgatccgctcaccaacgacgcggtggtggccgaggcg
ctcgccgtctcggcctccgggacggcgttcgacgtggtgccgggcgtgcccgcctccacc
gcggtgccggcctacgccggtgtcgcgctgggctccgcgcacgtcgaggccgacgtgcgg
gccggcgtcgactgggccgcgctcgccgccagcccgggaccggtcgtgctgcacgccacc
agtgcgctgctggccgacgtcgcgtccgggttgtccgcccagggcgtgcccgcggagacc
gcggtcgcgatcaccgccggtggcaccacgtccacccagcggacgatctcgtcgtcgatc
ggcaagctggccggcgacggcagcgacctggagggcgcgctggtgctgaccgtcggcgac
gccgccggtcgccgcggtgagctgtcctggtgggagtcgcgcgcgctgtacggctggcgg
gtgctggtgccgcggaccaaggaccaggccggcgtgatgagcgagcggctgcgcatgcac
ggtgcgatcccggaggaggtgccgacgatcgccgtcgagccgccccggtcgcccgcgcag
atggagcgctcggtgaagggcctggtcgacggccgctaccagtgggtcgtgttcacctcc
accaacgcggtgaaggccgtgtgggagaagttcgccgagttcggcctggacgcccgcgcg
ttctccggcgtgaagatcgcctgcgtgggccgctccaccgcggagaaggtccgcgagttc
ggcatcgagccggagctggtcccggacatcgacgaggcccagtcgtccacctccgagggg
ctgctggagatcttcccgccgtacgacgacgtgctggacccggtcgaccgggtgctgctg
ccgcgcgccgacatcgccaccgagacgctgtccgccgggctgcaggagcgcggctgggag
gtcgacgacgtgacggcctaccggaccgtccgtgcggccccgccgcccgcgccgatccgt
gaggcgatcaagaccggcgggttcgacgcggtgtgcttcacctcgtcgtcgacggtgcgg
aacctggtcggcatcgccggcaagccgcacgcccgcacgctggtcgcctgcatcggcccg
gccaccgccgagacggcccgcgagttcggtctgcgggtcgacgtgcagcccgaggaggcc
cgggtcccgagcctggtcgacgcgctggcgagccacacggccaagctgcgcgccgagggc
aacctgccgccgccgaagaaggtcaaggcgcgccgccgctga
DBGET
integrated database retrieval system
