Prunus avium (sweet cherry): 110757787
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Entry
110757787 CDS
T05161
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110757787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110757787
03036 Chromosome and associated proteins [BR:
pavi03036
]
110757787
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110757787
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110757787
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
110757787
NCBI-ProteinID:
XP_021815201
UniProt:
A0A6P5SN79
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MFGSTNSAFGQSSSSPFASQPVFGQTSNTSNNPFVPKPFGSTIPFGAQTGSSIFGGTSTG
VFGAAQSSSPFSSSTTFSASSSPAFGNTTPAFGAASSPAFNSSPSPFGGSSGFGQKPVFE
AFGSNTAQPSPFGSTTQPSQPAFGSGIFGSTTPFGGSSQPAFGATTTPAFGGTSSPAFGA
TSTPAFGATSTPAFGATSTPAFGATSTPAFGATSNPPAFGATSSPAFGSTTSPTFGSTGS
AFGVSNSSVFGSTGAFGASSTPAFGSSGSTFGTSSNPGFGASSAHGFGSSSTPSFSFTSA
PAFGQSNSTFSSASSPFGAQSSPFGSPAFGSTTSPTFGSTGSAFGVSNSSVFGSTGAFGA
SSTPAFGSSGSTFGTSSNPGFGASSAPGFGSSSTPSFSFTSAPAFGQSNSTFGSASSPFG
AQSSPFGSPAFGSTTSPTFGSTGSAFGVSNSSVFGSTGAFGASSTPAFGSSGSTFGTSSN
PGFGALSAPCFGSSSTPSFSFTSAPAFGQSNSTFGSASSPFGAQSSPFGAQPTTLGSNAF
GQSAFGGQQRRGSRVAAYTETPEPDGGSGATAAKLESISAMPVYKDKSHEELRWEDYQLG
DKGGPAPAGGSGFGMSASQPNSLNTASSFPQASTSPFNTATAPNLFSPKIPSFPSTGFGT
SSTAFSSSSFGSSFSFTSAPAFGQSNSTFGSASSPFGAQSTPFGAQPTPLGNNTFGQSAF
GGQQRGGSRVAAYTETPEPDGGSGATAAKLESISAMPVYKDKSHEELRWEDYQLGKKRRS
IIMKARWRRR
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttctactaactcagcttttgggcagtcatctagcagcccgtttgcatcccaa
ccagtctttgggcagaccagcaacacaagtaacaatccttttgttcccaagccttttggt
agcacaatcccgtttggtgcccaaacggggagttccatatttggcggcacttcaactggt
gtatttggtgcagctcaatcttcttcacctttttcttcctcaacgaccttcagtgcttca
tcctcaccagcttttggaaatacaactcctgcttttggagcggcttctagtccggctttc
aatagttcaccatcaccatttggtggttcatctggttttggtcagaagcctgtttttgaa
gcatttgggtccaatactgctcaaccaagtccttttggaagcacaactcagccatcacag
ccagcatttgggagcggaatatttggttccaccacaccatttggtggatcaagtcagcca
gcatttggtgctaccaccaccccagcctttggtggtacaagtagtccagcctttggtgct
acgagcaccccagcctttggtgctacgagcaccccagcgtttggtgctacaagcacccca
gcatttggtgctacaagtaccccggcctttggagctactagcaaccccccagcctttggg
gctacaagcagtccagcctttggttccacaacaagtcctacgtttggaagcacaggatct
gcattcggggtgtcaaattcctccgtgtttggatctacgggagcatttggggcttcaagc
accccagcttttggttcatctggatccacctttggtacttcaagcaatccaggttttggt
gcgtcaagtgctcatggttttggttcatccagtactccatctttcagctttacatcagct
cctgcttttggccaatcaaattctacatttagtagtgcctcatctccatttggagcacag
agttctccatttggcagtccggccttcggttccacaacaagtcctacatttggaagcaca
ggatctgcattcggggtgtcaaattcttcggtgtttggatctacgggagcatttggggct
tcaagcaccccagcttttggttcatctggatccacctttggtacttcaagcaatccaggt
tttggtgcgtcaagtgctcctggttttggttcatccagtactccatctttcagctttaca
tcagctccagcttttggccaatcaaattctacatttggtagtgcctcatctccgtttgga
gcacagagttctccatttggcagtccggccttcggttccacaacaagtcctacatttgga
agcacaggatctgcattcggggtgtcaaattcttcggtgtttggatctacgggagcattt
ggggcttcaagcaccccagcttttggttcatccggatccacctttggtacttcaagcaat
ccaggttttggtgcgttaagtgctccttgttttggttcatccagtactccatctttcagc
tttacatcagctcctgcttttggccaatcaaattctacatttggtagtgcctcatctccg
tttggagcacagagttctccatttggagctcagccaacaacattggggagcaatgccttt
gggcagtcagcttttgggggccaacaacgtaggggtagtagagtggctgcatatacagaa
actcctgaaccagatggtggtagtggggctactgctgcaaaattggagtcaatatcagca
atgccagtatataaagacaaaagtcacgaagaacttcgctgggaggattatcaattggga
gataaaggtggtccagctcctgctggtgggagtggctttggcatgtctgcgtcacaaccg
aactctttgaatactgcatcatcatttcctcaagcatctacaagtccttttaataccgca
actgcaccaaatttgttttctccaaaaatcccatccttcccttctactggctttggaaca
tcgtctacagcattcagttcatcatcttttggttcatctttcagctttacatcagctcct
gcttttggccaatcaaattctacatttggtagtgcctcatctccatttggagcacaaagt
actccattcggagcgcagccaacaccattggggaacaatacctttgggcagtcagctttt
gggggccaacaacgtgggggtagtagagtggctgcatatacagaaactccagaaccagat
ggtggtagtggggctactgctgcaaaattggagtcaatatcagcaatgccagtatataaa
gacaaaagtcacgaagaacttcgctgggaggattatcaattggggaaaaaaaggaggtcg
attattatgaaagcaaggtggcgcaggcggtaa
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