Prunus avium (sweet cherry): 110758188
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Entry
110758188 CDS
T05161
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi00040
Pentose and glucuronate interconversions
pavi01100
Metabolic pathways
Module
pavi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110758188
Enzymes [BR:
pavi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
110758188
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
Coat_X
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
110758188
NCBI-ProteinID:
XP_021815688
UniProt:
A0A6P5SPP7
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MGSEFIHGITWFLFLVAICAIKAKAISVNVVKFGAKGDGKTDDTKAFTQAWTQACSERQN
NKYVIPKGKYIVGPVDFAGPCKAKTIHFKVDGTVQSSKKQSVTGGAHRNAWISFTQVNNL
LISGDGIFDGQGSEFNCAKAKQCEQPPLNLIFSMVKDSHIQGITSNNSVGGQIGIYRSRN
VTVDDVSIGIRGGEGILIEKSTNINITNTDIKILSDNCVTILDGNTGINIEKMTCSQGNG
LGVSVLGNTGKEEPVNGVTVRNCTFSHTEGAIRIQSSAGSTANIAISNLVFEDIIFDYLQ
NMAIVLDQEHCPSKQCRTPNPSKVKVSNVSFKNIKGNSVDNRIVILECGTAPGACKDIKF
SDMRVLVVGDDHLETQFRCKNVKPVVSGKVDPAVCNTRPVA
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgggttcagaatttattcatggaattacctggtttttgttcttggtagcgatatgtgcc
atcaaagccaaagctatcagtgttaatgtcgttaaatttggagccaagggtgatggcaag
acagatgataccaaggctttcacacaagcatggacacaagcctgcagtgagaggcaaaat
aacaaatatgtgataccaaaaggaaaatatatagttggtccagttgattttgcagggccc
tgcaaagcaaaaactattcactttaaggttgacggaacagtgcagtcttcaaaaaagcag
tcggtaactggaggtgcgcaccgtaatgcgtggattagtttcacgcaggttaacaacttg
ctcatctcaggagatggcatttttgatggccaaggatctgaattcaattgtgctaaagct
aaacaatgcgaacaaccgcctctaaatttaattttctctatggttaaggattcacacatc
caaggcataacatcgaacaatagtgtcggcggccagattggcatttaccgttcaagaaac
gtgacagtggacgatgtttccatcggcatccgagggggggagggaatcctgatcgaaaag
tcaacaaacattaacatcaccaatacagacatcaaaatccttagcgacaactgtgtcact
atcctagatggaaacactgggatcaacatcgaaaaaatgacctgctcacaaggcaatggc
cttggtgtgagtgtcctaggcaacactggcaaagaggagccggttaatggagtgacggtg
agaaactgtaccttctcacacactgagggtgcaattaggatccagagttcggcgggttct
actgctaatatagccatctctaatttggtttttgaggacattattttcgactatcttcag
aacatggctatagtcttagaccaggagcattgcccatcaaaacagtgccgaacgccaaac
ccctccaaagttaaggtgtcaaatgtgagcttcaagaacattaagggcaactccgtggac
aatcgtatcgttattcttgagtgtggcactgcgcccggcgcatgtaaggacatcaagttt
agtgacatgagagttctcgtcgtaggggatgaccatttggagactcaatttagatgtaaa
aacgtgaagcctgttgtgtctggcaaagttgatcctgctgtttgtaatacacgacccgtt
gcctga
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