Prunus avium (sweet cherry): 110766229
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Entry
110766229 CDS
T05161
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110766229
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pavi01002
]
110766229
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pavi04121
]
110766229
Enzymes [BR:
pavi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110766229
Peptidases and inhibitors [BR:
pavi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110766229
Ubiquitin system [BR:
pavi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110766229
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
Nitroreductase
Motif
Other DBs
NCBI-GeneID:
110766229
NCBI-ProteinID:
XP_021825207
UniProt:
A0A6P5TDN4
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MTVMTPAPIDQPEDEEMLVPHSDLPENNHQPMEVVAQPETANNVENQPVEDPPSSRFTWR
IDNFSRMNTKKLYSDIFVVGGYKWRVLIFPKGNNVDHLSMYLDVADSASLPYGWSRYAQF
CLGVVNQIHNKYSVRKDTQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDILIIEAEVL
VRRVVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSQ
SIPLALQSLFYKLQYSDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLE
GDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLD
RENGKYLSPEADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED
IKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDRDKIICNVDEQDIAE
HLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARDENLVEQIGKDIYFDLVDHDKVRSFRI
QKQTPFNVFKEEVAKEIGIPVQFLRFWLWAKRQNHTYRPNRPLTPVEETQSVGQLREVSN
KVHNAELKLFLEVELGLDLRPIAPPDKTKDDILLFFKLYDPEKEELRYVGRLFVKSTGKA
AEILSKLNEMAGYAPEEEIDLYEEIKFEPNVMCEPIDKKFTFRACQLEDGDIVCFQKPTP
VENGEHLRYPDVPSFLDYVHNRQVVHFRSLEKPKEDDFSLELSKLHTYDDVVERVAQQLG
LDDPSKIRLTSHNCYSQQPKPQPIKYRGVERLTDMLVHYNQTSDILYYEVLDIPLPELQG
LKTLKVAFHHATKEEVVIHTIRLPKQSTVGDVINDLKTKVELSHPDAELRLLEVFYHKIY
KVFPHSEKIENINDQYWTLRAEEVPDEEKNLGPNDRVIHVYHFTKDTAQNQMQIQNFGEP
FFLVIHEGETLAEIKARVQKKLQVADEEFAKWKFAFLSLGRPEYLQDSDVVSSRFQRRDV
YGAWEQYLGLEHSDSAPKRAYAANQNRHTFEKPVKIYN
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcatgacccccgcccctattgatcaaccagaggacgaggagatgctcgtccca
cactcggatttgccagaaaacaatcaccaacccatggaagttgttgcacaacctgaaact
gctaataatgtggagaaccagccagtggaggatcctccatcatcaagattcacgtggaga
attgacaatttttctaggatgaatacaaagaagctttattcagatatatttgtcgttggt
ggctataaatggcgtgtgcttatttttcctaagggaaacaatgtagatcatttgtctatg
tatttggatgttgcggattcagcaagtttgccatatgggtggagtagatatgcacagttt
tgcttgggggtcgtcaatcaaattcataacaagtattcagtacgaaaagacacgcagcat
cagttcaatgcgcgagaaagtgattggggtttcacatccttcatgcctcttagtgaactt
tacgatcccagtagagggtatcttgtgaatgatatacttataattgaagctgaggttctc
gttcgtagggttgtagattactggacatatgattcgaaaaaggagacaggttatgtgggg
cttaagaaccaaggagcaacttgctacatgaactctctcctccagactttgtatcatatt
ccttatttcagaaaggctgtttaccatatgcccacaactgagaatgatttgccatcccaa
agcatacctttggccctgcagagtctattttacaagcttcagtacagtgacaatagtgtg
gcaacaaaagagctgacgaagtcttttggatgggacacgtatgattcatttatgcagcat
gacgtgcaagaactcaatagggttttgtgtgaaaaacttgaagacaaaatgaagggaact
gttgtagagggaactatacagaagttgttcgaaggacaccatatgaactacattgaatgc
atcaacgtggactacaaatcaacaagaaaggaatcattttatgaccttcagcttgatgtc
aaaggttgtcgtgatgtatatgcttcttttgataagtacgtagaagttgaacgtctcgag
ggtgataacaagtatcatgctgaacagtatggattgcaggatgctaagaaaggtgttctg
tttattgactttcccccggtgcttcaacttcagttgaaacgatttgagtacgactttatg
cgggacacaatggtgaagattaatgatcgttatgagttcccattgcaacttgacctcgat
cgagagaatgggaaatatttatcacctgaagctgataggagtgttcgcaacctttacaca
cttcacagtgttttggtacacagtggtggggtgcatggtgggcactattatgcctttatc
aggccaacgctttctgatcagtggtataaattcgatgatgagagggtcacaaaagaagat
ataaagagggcactagaggagcagtatggtggtgaggaagagttaccacagacaaaccct
ggattcaataacactcctttcaaatttacgaagtactcaaatgcatacatgctggtgtac
atacgtgaaagtgacagagataaaattatctgcaatgtggatgagcaggacatcgctgaa
catctaagggagaggttaaagaaagaacaagaagaaaaggaacacaagaagaaagaaaag
gcagaggcacacctatatactattataaaggttgcgcgggacgagaaccttgtcgagcag
attgggaaggatatttattttgatcttgttgatcatgacaaagttagaagttttcgtatc
cagaagcagacgccttttaatgtatttaaggaggaggttgcaaaagagattggtatacca
gtgcaatttctgcgattttggttgtgggcgaagcgtcaaaaccatacatatcgtcctaac
cgtccattgacgccggtggaggaaacacaatctgttggacagttgagggaggtatcaaac
aaggttcataatgcagaactaaagttattcttagaagtagagcttgggctggatttacgc
cctatcgctccacctgacaagacaaaggatgacattctgcttttctttaaactttatgat
ccagaaaaagaagaactacgatatgttggaaggctttttgtgaagagtactggtaaggca
gccgaaatattgtcaaaattgaatgaaatggctggctatgcccctgaggaagagattgac
ctttatgaggaaattaagtttgagcccaatgtcatgtgtgaacccatcgacaagaaattc
acatttcgagcctgccagcttgaggatggagacattgtttgctttcagaagcccactcca
gttgaaaatggagaacatctccgctatccagatgtcccatcttttctggactatgtgcac
aaccgtcaagttgttcacttccgatctcttgagaaacccaaagaagatgatttctcccta
gaattatcgaaactccatacctatgatgatgttgtggaacgagttgctcagcaacttggt
ttggatgatccatccaaaattaggcttacatcgcacaactgttactcacaacagcccaaa
ccccagccaattaagtatcggggggttgaacgcttgactgatatgctggtccactacaat
cagacttcagatatattgtactacgaagtattggacatccctctgcctgaattacaaggt
ttgaaaactctgaaagtcgcattccatcatgctactaaggaagaagttgttattcatacc
ataagactgccaaaacagagcactgtgggggatgtaattaatgaccttaaaacgaaggtt
gaattgtctcatccagatgcagaacttaggttgcttgaagttttctatcacaagatttac
aaggtttttcctcacagtgaaaagattgagaacataaatgatcaatactggacgttacgg
gccgaagaggttcctgacgaagagaaaaatcttggtcctaatgatcgtgtaattcatgtc
taccatttcactaaagacacagctcagaaccaaatgcaaattcaaaactttggggaacct
tttttcttggtcatacatgaaggtgagactttggctgaaattaaagctcgagtacaaaag
aaattacaggttgcggatgaggagtttgccaagtggaagtttgcgtttctttccctaggt
cgcccagaatatctccaggactctgacgttgtgtctagtcggtttcagagaagagatgtt
tatggtgcttgggagcaatatcttgggctggaacactctgacagtgctcctaaaagagcg
tatgcagctaatcagaatcgccacacatttgaaaagccagtaaaaatctacaactag
DBGET
integrated database retrieval system