Pseudomonas avellanae: BKM03_22905
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Entry
BKM03_22905 CDS
T05369
Name
(GenBank) RNA polymerase subunit sigma
KO
K03598
sigma-E factor negative regulatory protein RseB
Organism
pavl
Pseudomonas avellanae
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavl03021
]
BKM03_22905
Transcription machinery [BR:
pavl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
BKM03_22905
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MucB_RseB
MucB_RseB_C
LolA_like
Motif
Other DBs
NCBI-ProteinID:
AVB21730
UniProt:
A0A6H3CPV1
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All DBs
Position
complement(4775771..4776727)
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AA seq
318 aa
AA seq
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MRAVPLLPLLLGGWLALPVQADDAQDAINRLAKVDQQQSYQGTFVYERNGSFSTHRIWHR
VADGTTQERLLQLDGSAQEAVRLGGLTQCVSGTLEAGVTSPAVAAPRAFDLKRLSAWYDI
KTVGKSRVAGRPTTIVALSPKDQHRYGLELHLDNETGLLLKSLLLSERGQLLERFQFTDL
DTTSVLSEQMLKADADCKPVTVAKPKPEPSTPVAWHSDWLPPGFELSSSSARKDSATQSL
VTRLMYGDGLAQFSVFVEAVKGASSSDIRTQLGPTVAVSRRLTTPQGDMMVTVVGEVPMG
TAERIALSMRNDETPAKK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcgagccgtccctctactgccattactgcttggcggatggcttgccctcccggttcag
gctgatgatgcgcaagacgctataaatcgtcttgcgaaggttgatcagcagcaaagctat
caaggcacctttgtttacgaacgcaacggtagtttttctacccatcggatctggcaccgc
gtcgcggatggcacgacccaggagcgtttgttgcagcttgatggttctgcacaggaagct
gtaaggttgggtgggctcacccagtgcgtcagtggcacgctcgaagcgggcgttaccagc
ccggctgttgctgctccgcgtgccttcgatctcaaaagactttccgcctggtacgacatt
aaaaccgtcggcaaatccagagtggccggtcgcccgacaaccattgttgcgttgtcgccc
aaagaccagcatcgatacggtcttgaactgcatctcgataatgaaaccgggttattgctc
aagtcactgttgttgagtgaaagaggccagttgctcgaacgtttccagtttaccgatctt
gatacgaccagtgtcctgtccgagcagatgctcaaggccgatgctgactgcaaacccgtc
acggtcgcaaaacccaagcctgagccttcaacgcctgttgcatggcactctgactggttg
cctccgggtttcgagctcagtagcagcagcgcccgtaaggattcggccacgcaatcgttg
gttacccgactgatgtacggtgacggtctggcacagttttcagtgtttgtcgaagcagtg
aaaggcgcatcttcatcagatatccgaacccagctgggtcctactgtggcggtctcgcgt
cgtctcaccacgcctcagggcgacatgatggtgacagtggtcggagaggtgccgatgggc
acggccgagcgtattgcattgtccatgcgtaacgatgaaactccagcgaagaagtaa
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