Pseudomonas avellanae: BKM03_28635
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Entry
BKM03_28635 CDS
T05369
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pavl
Pseudomonas avellanae
Pathway
pavl00521
Streptomycin biosynthesis
pavl00523
Polyketide sugar unit biosynthesis
pavl00541
O-Antigen nucleotide sugar biosynthesis
pavl01100
Metabolic pathways
pavl01110
Biosynthesis of secondary metabolites
pavl01250
Biosynthesis of nucleotide sugars
Module
pavl_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
BKM03_28635 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BKM03_28635 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BKM03_28635 (rfbC)
Enzymes [BR:
pavl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
BKM03_28635 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AVB22745
UniProt:
A0A6H3CTJ9
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All DBs
Position
5966385..5966930
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AA seq
181 aa
AA seq
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MNVVATQLPEVLILEPKVFGDERGFFYESFNARAFQQATGLTRQFVQDNHSRSQRGVLRG
LHYQIENAQGKLVRVTVGKVLDVAVDIRRSSPNFGQWVGVELSAENARQLWVPEGFAHGF
VVLSEHAEFLYKTTDYYTPSAERCIAWNDPDLAIDWQFDAEPSLSAKDQQGKSLKDADLF
S
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtagtagccacacaattgccggaagtcctgattctggaacccaaggtattcggt
gatgaacgaggcttcttctatgaaagcttcaacgccagggcttttcagcaagccactggc
ctgacccggcagtttgtgcaggacaaccactcgcgctcgcaacgaggcgtgctgcgcggc
ctgcattatcagatcgaaaacgcacagggtaagctggtgcgcgtcactgtcggcaaagtg
ctggatgtggcggtggacatccgccgcagttcgccgaacttcgggcagtgggtcggcgtc
gagctgtccgctgaaaacgcccgtcagttgtgggttccggaaggttttgcgcatggtttc
gtggtgctcagtgagcatgccgagttcctctacaagaccaccgattactacacgccttcg
gccgagcgctgtatcgcctggaacgacccggacctggcgatcgactggcagttcgacgct
gagcccagcctgtcagccaaggatcagcaaggcaaaagcctgaaagacgccgatctgttt
tcctga
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