Pseudomonas avellanae: BKM03_30825
Help
Entry
BKM03_30825 CDS
T05369
Name
(GenBank) IS3-like element ISPsy9 family transposase
KO
K07497
putative transposase
Organism
pavl
Pseudomonas avellanae
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
BKM03_30825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
rve
rve_2
HTH_21
rve_3
HTH_Tnp_1
HTH_28
DDE_Tnp_IS240
HTH_32
HTH_23
HTH_29
Motif
Other DBs
NCBI-ProteinID:
AVB23432
LinkDB
All DBs
Position
p2_tig5:join(49979..50450,50450..51354)
Genome browser
AA seq
458 aa
AA seq
DB search
MGKYTEQAKLAAVKEYCAGKAGLRDVAHRHDVDFSCLRQWVAAYQIHGPAALKEKRRQRY
SDEFKLAVLKRMHDERLSLRQTAALFDIRQFGIINLWQRLFDEGALNASSKPPKKAGRPR
KMTTPLPPVNSAPINDESRSRDELLAEVKQLRMEVDYPKKARCLGSEEATNSAAEKAQIV
MELRPLHSLDGLLKFAGLARSTFYYQQKVLLADDKYAGLKDLIQATFYEHKGRYGYRRIT
AALRRAGHLVNHKTVQKLMGQLGLKSLIRVKKYRSYKGETGKAAPNLLKRDFKAQYLNQK
WATDVTEFKVGGQKLYLSPIMDLYSGEIISYAIARRPLYSMVDEMLEGAFKRLGPHEKPI
LHSDQGWQYRMPIYQRLLNENSITASMSRKGNCYDNAAIESFFSTLKSEFFYLNKFNDLD
ELQAGIEEYIEYYNHSRIKLKLNGLSPVEYRMQAAKAA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatacacagagcaggcaaaactcgcagccgtgaaagagtattgtgccggcaag
gcaggtttgagggatgttgcgcatcgccacgatgtggacttttcctgccttcgtcagtgg
gtcgcggcttatcagatccacggcccagccgctcttaaagagaaaaggcggcagcgttac
agtgacgaattcaagctggctgttttgaagcgcatgcatgatgagcgattatcactgcgc
cagacagcggccttgttcgatatccgtcagttcggcatcatcaatctatggcagcgcctt
tttgacgaaggtgcccttaacgcatcctcaaagccccctaagaaagctggacgcccaaga
aagatgacgacgccccttccccctgtgaactccgctccgatcaacgatgaatcgcgctcg
cgtgacgagttgcttgccgaggtgaagcaactgcggatggaggtcgattatcctaaaaaa
gctcgatgccttggttcagaagaagcaacgaatagcgcagcagaaaaagcgcaaatcgtg
atggaactgaggcctttgcattctctggacggcctgctgaagtttgccggtctggcacgc
agcactttttactatcaacaaaaggtactgctggcagatgacaaatacgccgggctgaaa
gacctgattcaggcaactttctacgagcacaagggccggtatggctatcgtcgcatcacg
gcagctttgcgcagggcgggccatcttgtgaaccacaagacggtgcagaaactaatgggg
cagctaggcctgaagagcctgatacgcgtgaagaaataccgttcctacaaaggcgaaaca
ggcaaggccgcgcctaacctgctaaagcgtgatttcaaagcgcaataccttaaccagaaa
tgggccaccgacgtgaccgaattcaaagtaggaggccagaaactctatctgtcgccgatc
atggatctgtacagcggcgaaatcatttcctatgcgattgccaggcgcccgctgtactcc
atggtcgacgaaatgcttgaaggagcatttaagcggcttggaccgcatgaaaagccgatt
ttgcattccgaccagggctggcaatatcggatgcctatttaccagcgactgctcaatgag
aattcgatcacagccagcatgtcgcgcaagggtaactgctacgacaacgcggctattgag
agtttttttagcacgctgaaatccgaatttttctacctgaacaaatttaacgatctggat
gagcttcaagcgggtatcgaagagtacattgagtattacaatcactcacgcataaaactg
aagcttaacggcctgagtcctgtggaatacagaatgcaggccgccaaggcagcgtag
DBGET
integrated database retrieval system
