Pseudomonas azotoformans: AYR47_30980
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Entry
AYR47_30980 CDS
T04879
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pazo
Pseudomonas azotoformans
Pathway
pazo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pazo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AYR47_30980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pazo03021
]
AYR47_30980
Transcription machinery [BR:
pazo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AYR47_30980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
GerE
HTH_31
HTH_3
HTH_24
HTH_28
Terminase_5
HTH_10
HTH_5
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AMN82457
UniProt:
A0A127I6X1
LinkDB
All DBs
Position
complement(6729144..6729653)
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AA seq
169 aa
AA seq
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MSGADTSHSDYVGGLFRSHYDWLCSRLHRHLDSRAHAEDIAADTFVQLLSAPGVMPIRQP
RALLTTIAQRLMYQLWRRRDLERAYLDALDNDETSTAPSPEELAQMLEALQAIDQLLDGL
PAKVKATFLLSQLNGLTYPEIASELGISQRSVSDYMTRAFNRCLRLCLE
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgccgacacttctcacagcgattacgtgggcggattgttccgcagtcattac
gactggctgtgcagccgtttgcaccgccacctcgattcccgcgcccacgccgaagacatc
gccgccgacaccttcgtccagctgctgagtgcgccgggggtgatgcccattcgccagcca
cgtgcgctgctcaccaccatcgcccagcggctgatgtatcaactgtggcgccggcgtgat
ctggaacgggcctacctcgacgcactcgataacgacgaaacctccaccgcgccctctccc
gaagagctggcgcaaatgctcgaagccctgcaagccatcgaccagttactcgacggcttg
ccggccaaggtcaaggcgacctttttgctctcgcaactcaatggcctgacctacccggaa
atcgccagcgaactggggatttcccagcgctcggtcagtgactacatgacccgcgccttc
aaccgctgcctgcggctgtgcctggaatga
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integrated database retrieval system