KEGG   Pseudomonas azotoformans: AYR47_30980
Entry
AYR47_30980       CDS       T04879                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pazo  Pseudomonas azotoformans
Pathway
pazo02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pazo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AYR47_30980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pazo03021]
    AYR47_30980
Transcription machinery [BR:pazo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AYR47_30980
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 GerE HTH_31 HTH_3 HTH_24 HTH_28 Terminase_5 HTH_10 HTH_5 HTH_11
Other DBs
NCBI-ProteinID: AMN82457
UniProt: A0A127I6X1
LinkDB
Position
complement(6729144..6729653)
AA seq 169 aa
MSGADTSHSDYVGGLFRSHYDWLCSRLHRHLDSRAHAEDIAADTFVQLLSAPGVMPIRQP
RALLTTIAQRLMYQLWRRRDLERAYLDALDNDETSTAPSPEELAQMLEALQAIDQLLDGL
PAKVKATFLLSQLNGLTYPEIASELGISQRSVSDYMTRAFNRCLRLCLE
NT seq 510 nt   +upstreamnt  +downstreamnt
atgtccggcgccgacacttctcacagcgattacgtgggcggattgttccgcagtcattac
gactggctgtgcagccgtttgcaccgccacctcgattcccgcgcccacgccgaagacatc
gccgccgacaccttcgtccagctgctgagtgcgccgggggtgatgcccattcgccagcca
cgtgcgctgctcaccaccatcgcccagcggctgatgtatcaactgtggcgccggcgtgat
ctggaacgggcctacctcgacgcactcgataacgacgaaacctccaccgcgccctctccc
gaagagctggcgcaaatgctcgaagccctgcaagccatcgaccagttactcgacggcttg
ccggccaaggtcaaggcgacctttttgctctcgcaactcaatggcctgacctacccggaa
atcgccagcgaactggggatttcccagcgctcggtcagtgactacatgacccgcgccttc
aaccgctgcctgcggctgtgcctggaatga

DBGET integrated database retrieval system