Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a1798
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Entry
PSEBR_a1798 CDS
T01472
Name
(GenBank) Putative exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSEBR_a1798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pba03400
]
PSEBR_a1798
Enzymes [BR:
pba01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PSEBR_a1798
DNA repair and recombination proteins [BR:
pba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PSEBR_a1798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AEA68012
UniProt:
F2KEL6
LinkDB
All DBs
Position
2200626..2201420
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AA seq
264 aa
AA seq
DB search
MKNLRIATFNINGIRARLPNLLEWLEREKPDIACLQELKAVDKDFPAAELESVGYGAIWH
GQASWNGVAILARDAQPLESRRGLPGGDDDNHSRYLEAAVHGVLVGCLYLPNGNPQPGPK
FDYKLAWFERLIDYAQGLQASDHPVVLAGDYNVVPTDMDIYNPRSWLKDALLQPESRACY
LRLLDQGWTDSLRHLYPDERIYTFWDYFRQHWQKNSGLRIDHLLLNPAASAYLSEAGVDA
WVRNQPHPSDHAPTWIRLASRKRR
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaccttcggatcgcgaccttcaacatcaatggcatccgggcccggctgcccaac
ctgctggaatggttggagcgggaaaaacccgacattgcctgtttgcaggagctcaaggcc
gtggacaaggatttcccggcggcggagctggagtcggtggggtacggggcgatctggcat
gggcaggcgtcctggaacggcgttgcgatcctggcccgtgacgcgcagccgctggagagc
cgccgaggcttgcccggtggggatgacgacaatcacagtcgctatctggaggcggcggtg
catggcgtgctggtgggctgcctgtacctgcccaacggcaatccgcaaccgggtccgaag
ttcgattacaagctggcgtggttcgaacggctgatcgactacgcccaagggttgcaggcc
agcgatcaccccgtggtgctggccggtgattacaacgtggtgcctaccgacatggacatc
tacaacccgcgctcctggctcaaggatgcgctgttgcagccagaaagccgcgcgtgctac
ctgcggctgctggaccagggctggaccgattcgttgcgccacctgtatccggacgagcgg
atctacactttctgggattatttccgccagcactggcagaaaaactccgggctgcgcatc
gatcacctgctgctcaacccggcggccagcgcctacctgagcgaggccggcgtggacgcc
tgggtccggaaccaaccccatcccagtgaccatgcgcccacctggatccggctggcgtca
cgcaagcggcggtga
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