Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a417
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Entry
PSEBR_a417 CDS
T01472
Name
(GenBank) Putative primosomal protein
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSEBR_a417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pba03400
]
PSEBR_a417
Enzymes [BR:
pba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSEBR_a417
DNA repair and recombination proteins [BR:
pba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSEBR_a417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
PriA_CRR
HypA
PriA-like_WH
AAA_30
zinc-ribbons_6
TrwB_AAD_bind
AAA_22
AAA_19
zinc_ribbon_15
nSTAND3
DUF2428
ADDB_N
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
AEA66560
UniProt:
F2KDE0
LinkDB
All DBs
Position
complement(512709..514928)
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AA seq
739 aa
AA seq
DB search
MPDAILRLALPSPLRRLFDYRAPAGVLRAQLHPGMRLRVPFGRREMIGILVEVTDHSEVP
VDKLKPALALLDATPPLPAALFKLCLWTSQYYQHSLGDTLSWALPVLLRQGEPAEARQER
FWSVAPGASLDDPRIARAPRQREALATLAQHPHGVAHQLLSKLMLSKDSLDLLLAKDLVQ
VEVRRHAPGARHEHWLAQPELPLNAEQRAACEAIRAGFDSYHAFLLAGVTGSGKTEVYLQ
LIRQTLEAGKQALVLIPEINLGPQTLARFEQRFNARIALVHSAVNDRERLEAWLAARDGE
ADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRARQENIPIVLGS
ATPSLESLHNAYTGRYGLLRLNERAGGAKQPRFLRLDVKSRPLDSGISGPMQQAIGQTLA
AGQQVLVFLNRRGFAPTLLCHDCGWMSGCERCDARMTVHQRHGELRCHHCGHVERVPRHC
PQCGKVDLRPVGAGTERAEERLGILFPDYPVLRVDRDSTSRKDAMNQLFATIQKGQPCIL
VGTQMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGKVII
QTHLADHPLLIQLTEQGYFAFAEQALSERRSAGLPPFAHLALLRAEAHKPGQAEGFLDEA
CSEAERLLAEQNLTGIELLGPVPAPMERRAGRYRAQLLLQANARAPLHRLLSAWLLVLEQ
MPSGRAVRWSLDVDPVDLY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacgccatcctgcgcctcgccctgccttcgcccctgcgccgcctgttcgactac
cgcgccccggccggggtcctgcgcgcccagttgcacccgggcatgcgcctgcgggtgccg
ttcggccggcgggagatgatcggtatcctggtggaggtcaccgaccacagcgaggtcccg
gtcgacaagctcaaaccagccctggccctgctcgatgccacgccaccactgcccgccgcg
ctgttcaagttgtgcctgtggacgtcccagtattaccagcacagcctcggcgacaccctg
agttgggcgctgcccgtgctgctgcgccagggcgaaccggccgaggcgcgccaggagcgg
ttctggtcggtggcgcccggcgcctcgctggacgatccacgcatcgcccgcgccccgcgc
cagcgcgaggccttggcgaccctggcccaacatccccacggcgtggcgcatcaattgttg
agcaaactgatgctcagcaaggacagcctcgacctgttgctggccaaggacctggttcag
gtggaagtgcgcaggcacgcccccggcgcccgccatgaacattggctggcccagccggaa
ctgccgctcaacgccgaacagcgggccgcttgcgaagcgattcgcgcaggtttcgacagt
tatcacgcctttctgctggcaggtgtcaccggcagcggcaagaccgaggtctacctgcaa
ctgatccgccagaccctggaggccggcaagcaggcgctggtactgattccggaaatcaac
ctcggcccacaaaccctggcgcgcttcgaacagcgcttcaacgcccggatcgccctggtg
cactcggcggtcaacgaccgcgaacgcctggaagcctggctcgccgcccgtgacggcgag
gccgacatcatcatcggcacccggtcggccctgttcactccgatgaagaaccctggcctt
atcatcatcgacgaagaacacgacggttcttataaacagcaagaaggcctgcgctatcac
gcccgcgacctggcattggtgcgcgcccgccaggaaaacatcccgatcgtcctcggctcg
gccacgccatcgctggaaagcctgcacaacgcctataccggccgctacggcctgctgcgc
ctcaatgagcgggccggcggcgccaagcaaccgcgtttcctgcgcctggacgtgaaaagt
cgcccgctggacagcggtatttcgggaccgatgcagcaagccatcggccagaccctggct
gccgggcaacaggtcctggtgttcctcaatcgccgcggtttcgctccgacgctgttgtgc
cacgactgcggctggatgtccggctgcgaacgctgcgatgcgcggatgaccgtgcatcaa
cgccatggcgagctgcgctgccaccattgtggccacgtcgagcgcgtgccaaggcactgc
ccgcagtgcggcaaagtggacttgcgcccggtcggcgccggcaccgaacgcgcagaagaa
cggctgggcatcctgttccccgattacccggtactgcgggtggatcgcgacagcacttcg
cgcaaggacgcgatgaaccagttgttcgccacgatccagaagggccagccgtgcatcctg
gtgggcacgcagatgctcgccaagggacaccacttcccacgggtcacgctggtgtcgatc
ctcgacgccgatggcggactgttttccggtgacttccgcgccagcgagcgcatggcgcag
ttgatcgtccaggtcgcaggccgggccgggcgggccgaggagccgggtaaagtgatcatc
cagacccacctggccgatcacccgttgctgatccaactgaccgaacaaggttatttcgcc
ttcgccgagcaggccttgagcgaacgccgcagcgccggcctcccaccttttgcccacctg
gcgctgttgcgggccgaagcccacaagccggggcaagccgaaggctttctcgatgaggcc
tgcagcgaggcagagcgcttgctggcggagcagaacctcaccggcatcgaactcttgggc
ccggtgccggcgccgatggaacggcgggccgggcgctatcgcgcgcagcttttattgcag
gccaatgcccgggcgccgctgcatcgactgctgagcgcctggctgctggtactggaacag
atgcccagcgggcgggcggtgcgctggtcgctggatgtggatccggtggatttgtattga
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integrated database retrieval system
