Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a970
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Entry
PSEBR_a970 CDS
T01472
Name
(GenBank) putative porin B precursor
KO
K07267
porin
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pba02000
]
PSEBR_a970
Transporters [BR:
pba02000
]
Other transporters
Pores ion channels [TC:
1
]
PSEBR_a970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
AEA67141
UniProt:
F2KCK9
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All DBs
Position
1235841..1237397
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AA seq
518 aa
AA seq
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MHLFFENAERIMSTRSSHRYSNNNKGNTVLYMNDKREAVLQTCLAATRSPSTLNVILLMS
MFTFLSAPECRAQAQTQDGSQTPVAPTVQSTQILTPPPLEGTTLPPVDSKCLKYDQTNTR
IMSTIYLPTTCDTISPTLFGLRDALTDAGWGIRGRVSAAMDYDVKNRYSSSTPQKYSGQN
LSAYTISNVYVTYDLGRNGFPLGSQFTGSLTQVNSSGGQGEPADMDPAVAILGVTVPLLD
NALELKAGYFLLSQDFVGSNLTGNAGTVSQGVQSSIPALVGMSVFTPTPTAEITIRDPWT
KNFYLHSAVSNSVSSEGAITELERNPTGLKWGTKDTGPMYVNEVGYKTAMTPTSLPVWAR
AGFIYNTTDYAKFNGGQSDDNYAAYAGLTMQLTKNATNPGGLNLDIKVDAAPSDRNIYTK
DFAINLFYVAPFESRPFDMVSVGYSKSWESPELQDAVAAGGVRNTSRVTSQGAVSYAYRL
DQGIYFISTASYVTNPGTVAEEEMPAALIVNAALMFNF
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcacctattttttgagaatgcagagcggatcatgagcactcgtagcagtcaccgctac
tcaaataataataaggggaacaccgtgctctacatgaatgataagagagaggctgtgctt
cagacttgccttgcagcaacgcggtcgccgtcaacgctcaacgtaatcttgctgatgtcg
atgttcaccttcctgagcgcgcccgaatgcagggcgcaggcacaaacacaggacggttcg
cagacacccgtagcgcctacggtgcaatcaacgcaaatcctgacccctccgccgttggag
gggacgacgcttccaccggtcgattcaaagtgtctcaaatacgatcaaaccaatacccgg
atcatgagcacgatctatttgccgacgacgtgcgataccatttcgccaaccttgttcggt
cttcgagacgcgctgactgacgcaggttggggcatacgcggtcgggtaagtgccgcgatg
gattacgatgttaaaaacaggtacagctcttccacaccacaaaagtattccgggcaaaat
cttagcgcttacacaatcagcaacgtctatgtcacttatgatttggggcgaaacggattt
ccgttgggttcccagtttaccggtagcctgactcaggttaactcttctggtgggcagggc
gagccggctgatatggacccggcggtggccattctgggggtcactgtaccgttgctggat
aatgcgctggaactcaaagccggctactttctgttgagtcaggattttgtcggaagcaat
cttaccggcaacgcgggaaccgtctcacaaggggtgcagagttcaatccctgcgttggtg
gggatgagtgtgttcaccccaacgccaacggcggaaattaccatcagggatccttggacc
aagaacttctatctccactctgcggtgtccaatagcgtcagttctgaaggtgccatcacg
gagttggagcgaaatcctacggggctgaagtggggcaccaaagacaccggcccgatgtat
gtcaatgaagtgggttacaaaacggcaatgacccccactagcctgcctgtctgggcccgg
gccggttttatctacaatacaaccgactatgccaagttcaacggggggcaatcagacgat
aactacgcagcctatgccggcctgacgatgcaactcaccaaaaacgcgactaaccctgga
ggtctgaacctcgatataaaagtcgatgcggcgccctcggaccgcaatatctacaccaaa
gattttgcgattaaccttttttatgtggctcccttcgagagccgaccattcgatatggtt
tcggtcgggtacagcaagtcctgggaaagtcctgagctacaggatgctgtcgcagcgggt
ggggttcgaaacacttcgagagtgaccagccaaggagccgtgtcgtacgcgtatcgactg
gatcaaggcatatatttcatctcgaccgcgtcttacgtcacgaaccctggaacggtggcg
gaagaggaaatgccggcggccctgattgtcaacgcggcgttaatgtttaacttctga
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