Paenibacillus barcinonensis: HUB98_13910
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Entry
HUB98_13910 CDS
T06922
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pbac
Paenibacillus barcinonensis
Pathway
pbac00521
Streptomycin biosynthesis
pbac00523
Polyketide sugar unit biosynthesis
pbac00541
O-Antigen nucleotide sugar biosynthesis
pbac01100
Metabolic pathways
pbac01110
Biosynthesis of secondary metabolites
pbac01250
Biosynthesis of nucleotide sugars
Module
pbac_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
HUB98_13910 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HUB98_13910 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HUB98_13910 (rfbC)
Enzymes [BR:
pbac01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HUB98_13910 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QKS57291
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All DBs
Position
complement(3007780..3008325)
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AA seq
181 aa
AA seq
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MKVIPLFMKGAAVLEPKIYGDHRGYFMESYNEQILMQHGIHHNFIQDNQSLSAEAGVLRG
LHYQLHPKAQTKLVRVISGAVYDVIVDIRKASPTFGQWKGVILSEHNQRQLLVPQGFAHG
FCTLVPDTQVVYKVDAYYSPEHDRGILWKDPALAIDWPVTEPILSDKDQKHPVLQDAELN
F
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaattccgctttttatgaagggtgcagctgtactggagccgaagatatatgga
gatcatcgcggatattttatggaaagttataatgagcagattctaatgcaacacgggata
catcataactttattcaggataatcaatccttgtcggcagaggcgggagtgctgcgaggg
ctccattatcagcttcatccgaaagcgcagaccaaactggtgagagtgatatctggagct
gtgtacgatgtcatcgtagatatccgcaaagcttcaccgacttttggtcagtggaagggt
gtcatactcagcgagcacaatcagcgtcagctattagttccccaagggtttgcccatggc
ttctgcacactggttcccgatacacaagtggtttacaaagtggatgcttattattcacct
gaacatgaccgtggcattctttggaaagatcccgcgcttgcgattgattggcctgtaacg
gaaccgatcttatccgataaggatcagaagcatcctgtgcttcaagatgcagagctgaat
ttttaa
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