Roseinatronobacter sp. S2: P8S53_04335
Help
Entry
P8S53_04335 CDS
T09279
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pbae
Roseinatronobacter sp. S2
Pathway
pbae03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P8S53_04335 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbae03400
]
P8S53_04335 (uvrB)
DNA repair and recombination proteins [BR:
pbae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P8S53_04335 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P8S53_04335 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF87
AAA_16
AAA_22
UB2H
AAA_19
Kinesin
TrwB_AAD_bind
AAA
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
WFE76396
LinkDB
All DBs
Position
complement(927629..929749)
Genome browser
AA seq
706 aa
AA seq
DB search
MEGGRRFRMASPFLPAGDQPTAIAELVEGVNSGEQNQVLLGATGTGKTYTMAKIIEETQR
PAIILAPNKTLAAQLYGEFKGFFPDNAVEYFVSYYDYYQPEAYVARSDTYIEKESQINEQ
IDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYSAMTQDLKAGEAYDSRLIMAELVA
QQYRRNDAAFQRGSFRVRGDVIEIWPAHLEDRAWKLSFFGDELEGITEFDPLTGAKTNSF
EQIRIYANSHYVTPRPTMQQAVKGIKHELQQRLDQLTAEGKLLEAQRLEQRTKFDLEMLE
ATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDNAIVFADESHVSVPQIGGMYRGDYRRK
FTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPSKWELEQTGGVFTEQVIRPTGL
IDPQVEIRPVHMQVDDLLDEIRKVALRDLRVLVTVLTKRMAEDLTEYLHEQGIRVRYMHS
DIDTIERIEILRDLRLGAFDVLIGINLLREGLDIPECGLVAILDADKEGFLRSETSLVQT
IGRAARNADGRVIMYADRITGSMERALAETDRRREKQVAYNEKHGITPQTVRKNVEDVLA
GMWQGDTDLARVTAQIDKVKPGANLAAHLEGLRTDMRKAAENLEFEEAARLRDEVKRLEA
VELAIADDPLARQSEVQQAVEDAAVKGRSTAGRPGQRGGVKKRRGR
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcggcagacgctttcgcatggccagcccgttcctgcctgctggcgaccagccc
accgcgattgcggagctggtcgaaggcgtaaattcgggcgagcagaatcaggtgcttctg
ggggcaaccggcaccggcaagacctatacgatggccaagatcattgaagaaacgcagcgt
ccggccatcattctggcgccaaacaaaacgcttgccgcccagctatatggcgaattcaag
ggcttctttcccgacaatgcagtggaatatttcgtcagctactatgactattaccaaccc
gaagcctatgtcgcgcggtccgacacctatatcgagaaagaaagccagataaacgaacag
attgaccggatgcgccactcggccacccgcgcgcttctggaacgtgatgatgttatcatc
gtggcgtctgtatcgtgcatttatggcatcgggtccgtcgaaacctattcggcaatgaca
caggatctgaaagcgggagaggcatatgactcacgcctgatcatggccgaactggtcgcg
cagcaataccgccgcaacgacgcggcctttcagcgcgggtcattccgtgtgcgcggcgat
gtcatcgaaatctggcctgcccaccttgaagatcgcgcctggaaactgtcgtttttcggg
gacgaactggaaggaattactgaattcgaccctttgacaggggcaaagaccaacagtttt
gaacagatcaggatttatgccaacagccactatgtgaccccgcgccccaccatgcagcag
gcggtcaagggcatcaaacatgaattgcaacaacgcctggaccagctaacagccgagggc
aagctactggaagcgcagcggctggaacagcgcacgaaatttgatctggaaatgctggaa
gccaccggcgtttgcaacgggattgaaaactattcgcgctacctgacaggccgcgcaccg
ggtgaaccaccgcccacattgtttgaattcatccccgacaacgccatcgtgttcgcagat
gaatcgcatgtgtcggtgccgcagatcggcggcatgtaccggggtgactacaggcgcaag
tttacgctggccgaacacggcttccgcctgccgtcctgcatggataaccgcccgctgaaa
tttgaagaatgggacgccatgcgcccgcaatcggtgtttgtgtccgcgacaccgtcaaaa
tgggaactggaacagaccggcggtgttttcaccgaacaggtgatccgccccacagggttg
attgatccacaggtggaaatccgccctgtgcatatgcaggtggatgacctgctggatgaa
atccgcaaagtggcgctgcgcgatctgcgggttctggtgacggtgctgaccaagcgcatg
gccgaagatctgaccgaatacctgcacgagcagggcattcgcgtgcgctacatgcattcc
gacatcgacacgatcgaacggatcgaaatcctgcgcgatttgcggctgggtgcgtttgat
gtgctgatcggcatcaacctgctgcgcgaggggctggatattcccgaatgcgggctggtc
gccattctggacgccgacaaggaagggttcttgcggtccgaaacgtcactggtgcagact
atcgggcgggctgcgcgcaatgccgacgggcgcgtgatcatgtatgccgaccgcatcaca
gggtcgatggaacgcgcgcttgcggaaacggatcgtcgccgcgaaaagcaggtggcctat
aacgaaaagcacggcatcacgccccagaccgtgcgcaagaatgttgaagatgtgctggca
ggcatgtggcagggcgatacagacttggcgcgtgtgaccgcccagattgataaagtgaaa
cccggcgcaaaccttgcggcgcatctggaagggctgcgcaccgatatgcgcaaagccgcc
gagaaccttgaattcgaagaagccgcccgcctgcgcgatgaagtcaagcggctggaagcg
gtggaactggccattgccgatgacccgcttgcgcgccagtccgaagttcagcaagccgtc
gaagatgccgccgtcaagggccggtctaccgccggtcgtccggggcagcgcggcggcgtg
aaaaagcggcggggccggtga
DBGET
integrated database retrieval system
