KEGG   Pogonomyrmex barbatus (red harvester ant): 105426006
Entry
105426006         CDS       T04903                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA ligase 3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
pbar  Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pbar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    105426006
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbar03400]
    105426006
Enzymes [BR:pbar01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     105426006
DNA repair and recombination proteins [BR:pbar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     105426006
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C RNA_ligase BRCT
Other DBs
NCBI-GeneID: 105426006
NCBI-ProteinID: XP_011635365
UniProt: A0A6I9W2I0
LinkDB
Position
Unknown
AA seq 665 aa
MSRDLEAVVRRFLPNPEEKSCPSSSPSSRNKVAISLMTPVLPMLAEACTSVEMAMRKCPN
GMLSEVKYDGERVQVHKSGNDFRYFSRSLKPVLPHKVNLFKDYIGQAFPDGDDLILDSEV
LMVDNETGQPLPFGTLGIHKKAEFKNANVCLFVFDCLYYNGEILIDKSMLERRNILKDRM
TEIPNRIMLSEVHEVHDPRDLAERIIHVLKLGLEGLVLKDIDSKYEPGKRHWLKVKKDYL
CGGAMADSADLVVLGAWYGTGNKGGMLSVFLMGCYDEKRDKWLTVTKVHTGHDDATLAAL
QDELDMVKIGKDAEKLPNWLLAKKPMVPDFVAKDPKKQPVWEITGAEFTNQGVHTADGIS
IRFPRVTRIRDDKDWSTATNLEELRNLFKREPESLDFDHLLNVPTDVNARHTSPRKKPSG
SPRKDTSPGKVESARKRTNSWDMPSTSSKIKEEPLPGTPVKKRKRDECDQGPSSEDRIPS
ESEGLKMKHELKKETEEPSSTSGFSPKKEKRFRDSGMKREGEDHCTDRLAGETERSFESS
KDTSASDSDVEDTKFNNVLQDVRASLAPGFDTSRRKDARKMLKILGATIVTPENGHDSTT
THIIHTRMEIPSSVILRDFADFPRTVKHVNVSWLEETAARSRKQDEVQHAVQLVGDYCNC
SCIHR
NT seq 1998 nt   +upstreamnt  +downstreamnt
atgtcccgggatttggaagcggtggtgcgacgtttcctgccgaatccagaggaaaagtca
tgcccctcgagctcaccttcaagccgcaataaagtcgctatctcgctgatgacccccgtt
ttaccaatgctggccgaggcatgcacatctgtggaaatggcgatgcggaagtgcccgaat
gggatgttatcggaggtcaagtacgacggtgagcgtgtgcaggtgcacaaaagtggaaac
gattttcgatacttcagcagatctcttaagccggttttgcctcataaggtgaatctcttc
aaggattacataggacaggcgtttcctgatggggatgatctgattcttgattctgaggtt
cttatggttgacaatgagaccggacaacctctgcctttcggcactttaggaattcacaaa
aaagctgaattcaaaaacgccaatgtgtgccttttcgttttcgactgcttgtattataac
ggcgagatacttatagacaaatctatgcttgaacgcaggaacatcttgaaagacaggatg
accgagataccgaacagaataatgttgtcggaagtacacgaagtgcacgatccgcgggat
ttagcggaaaggattattcacgtgttgaaactgggtctcgagggtttggtcctgaaggat
atcgacagcaaatacgagcctggtaagaggcactggttgaaggtaaaaaaggactatctc
tgcggcggtgcgatggctgatagcgcagatctcgtcgtgcttggtgcatggtacggcaca
ggtaacaaaggcggcatgctatcggtctttttaatgggttgctacgatgagaagcgcgac
aagtggttaaccgttaccaaggtccacacggggcatgacgatgctaccctggcggcgttg
caggacgagcttgacatggtgaagatcggcaaggacgctgaaaagctgccgaattggttg
ctcgccaagaaacctatggtgccggactttgtagcgaaggatcccaagaaacaaccggta
tgggagataacgggcgccgagtttacaaaccagggggtgcacaccgcggacggcatcagc
atccggtttccgcgcgttacgcggatccgcgatgacaaggactggtcaacggccaccaac
ctggaggagctgcgcaatctcttcaaaagggagcccgagtctctcgatttcgatcacctg
ctaaacgttccaacggacgtcaacgctcgtcatacgagtccgagaaagaaaccgtctggt
tctccaaggaaggacacgtcgccagggaaggtcgaaagtgcgaggaagagaacgaactcg
tgggacatgccatcgacgagttccaagatcaaggaggaaccgcttccgggaacgcccgtc
aaaaaacgaaaaagggatgaatgcgaccaaggaccttcttcggaagacagaatcccatca
gagagcgagggattgaagatgaaacacgagctcaagaaagaaacagaggaaccttcgtcg
acttcgggattctctcccaagaaggagaaaagattcagggattcagggatgaaacgagaa
ggggaggatcattgcaccgatcgtcttgccggcgagacggaaagatccttcgagtcctcg
aaggacacgagtgcctccgattcggatgtcgaagataccaaatttaataatgtgctgcaa
gatgtacgagcgagcctcgcgcctggtttcgatacgagcaggaggaaggacgcacggaaa
atgcttaaaatactcggcgccacgatagtcacgccggagaacggacacgactcgacgacg
acccacatcatccacacgcgcatggaaattccgtcctccgtcattctcagggactttgcg
gactttccgagaaccgtcaagcatgtgaacgtgtcctggctggaggaaaccgcggcgcgg
tcgaggaagcaagacgaggtccagcatgcggttcagctagtgggcgattactgtaattgt
tcgtgcatacatcggtaa

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