Limihaloglobus sulfuriphilus: SMSP2_02864
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Entry
SMSP2_02864 CDS
T04749
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pbas
Limihaloglobus sulfuriphilus
Pathway
pbas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SMSP2_02864 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbas03019
]
SMSP2_02864 (rhlE)
Enzymes [BR:
pbas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SMSP2_02864 (rhlE)
Messenger RNA biogenesis [BR:
pbas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SMSP2_02864 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
UTP25
ResIII
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AQQ72478
UniProt:
A0A1Q2MIW6
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All DBs
Position
3676144..3677565
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AA seq
473 aa
AA seq
DB search
MPFKSLGLSDPLVRGILATGYSAPTKIQSEAIPAALEGRDLIACAQTGTGKTAAFVLPIL
HRLELMDPPAKHRNPKALILTPTRELALQIEGCIQDYGRYLDIRALTVYGGSKMGSQLQA
LKRGIDILVATPGRLLDHMDRKSVSLSDVEVLVLDEADRMFDMGFIKDVQKIVRSVPKSR
QTLLFSATISDDIDRLAGGIQKDPLTIVVGKKRNPIETINQRVYFVRKQLKPVLLKHMLN
TEKMETVLIFSRTKHGADRITRNLQREGFNTIAIHSNRTQSQRLKALEGFKAGRYQIMVA
TDIAARGIDVEGISHVINYDVPKHPEDYVHRIGRTGRAEATGDAITLVTEEEGPELSRIE
KYTDKYLEPMLYPDFDNEQAAPPRLPRGPRSDSRQGGQRSRGKGGSGRRRDSRGDSRSAK
SESSQSGDKKKNSRRRKPKSASNSQGGGKQDSSNQNQNKKRRRKPRKDSQKSD
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttaaatctttaggtctttcagacccgcttgtacggggaatcctggctacaggt
tactccgcccccaccaaaatacaatccgaagcaattcccgccgcacttgaaggccgcgat
ttgattgcatgtgcacagaccggaaccggcaaaaccgcggcgtttgtactgccgatactt
caccgtctggaattaatggacccgcctgcaaaacaccgcaacccaaaggcacttatactc
accccgacacgtgagctggccctgcagattgagggctgcatacaggattacggccgttat
ctggatatccgtgcacttaccgtttacggcggttccaagatgggcagccagcttcaggca
ctgaagcgggggatagatatacttgttgctacgcctggcaggctgcttgaccatatggac
cgcaagagtgtcagtctctcagatgtagaggtgcttgtgcttgatgaggcggaccgtatg
tttgatatgggttttataaaagacgtccagaaaatagtccgcagcgttccaaagagccgc
cagactcttcttttttccgctacgatatctgatgatattgaccggctcgccggcggaatc
cagaaggatccgctgaccatagttgtcggcaagaaaagaaaccccatcgagacgatcaac
cagagggtgtattttgtccgtaagcagcttaaacctgtgcttttaaagcatatgctcaac
acagaaaagatggaaacagttcttatcttctcgcgtaccaagcatggcgcagaccgaata
acacgcaacctgcagcgagagggctttaacaccatcgcgatacactccaaccgcacacaa
tcccagcggctcaaagcgctggagggtttcaaagcgggcaggtaccagattatggtagcc
actgacatcgcggcacgcggtattgatgtcgagggcatcagccatgtgataaactatgac
gtgccaaaacaccccgaggattatgtccaccgaatcggtcgtaccggcagggcagaggca
accggcgacgcgataacgcttgttacagaagaggaaggtcccgagcttagccgaattgaa
aaatatactgacaaatatcttgagccaatgctctatccggattttgataatgaacaggcc
gctccgccgagattgccgcgagggcccagaagtgactccaggcagggcggacagcgttca
cgcggcaagggcggctccggccggcgaagagattcccgcggagacagccggtctgcaaaa
agcgaatcaagccaatccggcgacaagaagaaaaactcccgccggcggaaaccaaaatca
gcctccaattctcagggaggcggtaaacaggacagctcaaaccagaatcagaacaaaaaa
cgccgcagaaaaccccgtaaagattcacaaaaaagtgattga
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