Polaribacter batillariae: JL193_05240
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Entry
JL193_05240 CDS
T08207
Name
(GenBank) GIY-YIG nuclease family protein
KO
K05984
excinuclease Cho [EC:3.1.25.-]
Organism
pbat
Polaribacter batillariae
Brite
KEGG Orthology (KO) [BR:
pbat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbat03400
]
JL193_05240
DNA repair and recombination proteins [BR:
pbat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JL193_05240
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
Motif
Other DBs
NCBI-ProteinID:
QTD39287
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All DBs
Position
1193936..1194736
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AA seq
266 aa
AA seq
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MLIELRLVDNLPEKHGVYYFKNIRKEIIYVGKANNIKQRVISHFYNRKKKEQEMCMEIAQ
VSYTETGSELLALLLESSEIKHRYPKYNHAQKHNREAIGLFTYEDQKGIIHLAFNKLKLT
PNPIMSFFSLTACRTFLEKLCQEFELCPKYCHLQTNVTRCFHHQIKECRGICCDKETVES
YNKRVQEAIISVSIGSKNLVLKESGRTANEIGFALILNGSYKGFGYLDTGQDALLENPED
YQFFVQPQKDNSDIQKILRAYIHKNK
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
attttaatcgaactcaggttagtagataatttacccgaaaaacatggtgtttattatttt
aaaaacattcgaaaagaaattatttatgttggcaaagccaataacataaaacaacgtgta
attagccatttttacaatcgaaagaaaaaagaacaagaaatgtgtatggaaatcgcacag
gtttcttatacagaaaccggaagcgagttactagcgttattgttagaatcttcagaaata
aaacatcgatatccaaaatacaaccatgcacaaaaacacaatagagaagcaattgggctt
tttacttacgaagaccaaaaaggcattattcatttggcttttaacaaactaaagttgact
ccaaacccaattatgagtttcttttctcttactgcttgcagaacgtttttagaaaaactt
tgtcaagaatttgaattgtgccctaaatattgtcatttacaaacaaatgttacccgttgt
tttcatcatcaaattaaagaatgtagaggcatttgttgcgataaagaaactgtagaaagt
tataataaacgagtgcaagaagccattatttctgtaagtattggttctaaaaatttagtt
ttaaaagaatctggaagaactgcaaacgaaattggttttgcattgattttaaatggaagc
tacaaaggttttggttatttagatacaggccaagatgcactattagaaaatccggaagat
tatcagttttttgtacaaccacagaaagacaatagcgatattcaaaaaatattgagggct
tacattcataaaaacaaataa
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