Pseudomonas brassicacearum DF41: CD58_05940
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Entry
CD58_05940 CDS
T03174
Name
(GenBank) RND transporter
KO
K18302
membrane fusion protein, multidrug efflux system
Organism
pbc
Pseudomonas brassicacearum DF41
Module
pbc_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbc02000
]
CD58_05940
01504 Antimicrobial resistance genes [BR:
pbc01504
]
CD58_05940
Transporters [BR:
pbc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CD58_05940
Antimicrobial resistance genes [BR:
pbc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
CD58_05940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
Biotin_lipoyl
CusB_dom_1
PTS_EIIA_1
HTH_Tnp_Mu_1
FliJ
Motif
Other DBs
NCBI-ProteinID:
AHL32456
UniProt:
W8PS40
LinkDB
All DBs
Position
1331530..1332630
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AA seq
366 aa
AA seq
DB search
MLRYALSLALPVSLAFLLSACGHDEPVPMAVRPAMVVKPQPSAQAMDSYPGEVRARFEPD
LAFRIGGKVSRRLVEEGQRVKANQALAELDPEDVRLQLEASRAQVAAAEANLNLVRAERD
RYKTLMERQMVSRSQYDNAENLYRSGAARLKQIKAEFDVANNQASYSILRAPQDGVVARR
SVEVGQVVSAGQTVFTLATDGEREVLIDLPEQSFGRFKIGQPVSVELWSQPDQRFSGRIR
ELSPAADPKSRTFAARVAFTAGSVPAELGQSARVFIQAADKVSLSVPLSALTAENGATFV
WVLNANNTLKKVPVRVGAFGEKTVPVLEGLGPDDWVVAAGVHVLLDGQQVRPVDRSNRVV
NLAAKE
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgctccgctatgcgttgtccctcgccctgccagtcagcctggcgtttttattgtctgcg
tgtggtcatgacgagccggtgccgatggccgtgcgccccgccatggtggtgaaaccacag
ccttcggcccaagccatggacagttatcccggcgaagtgcgcgcccgcttcgagcccgat
ctggcctttcgcattggcggcaaggtgagccgacgactggtcgaggaggggcagcgggtc
aaggccaatcaggcgctggccgaactcgaccccgaggatgtgcgtctgcaactggaagcc
tcccgcgcccaggttgctgccgccgaggccaacctgaacctggtgcgtgccgagcgtgac
cgctacaagaccttgatggagcggcagatggtcagccggtcccagtacgacaacgcggaa
aacctttatcgttccggcgctgcgcggctcaagcagatcaaggccgaattcgacgtcgcc
aacaatcaggccagctactcgatattacgtgcgccgcaggatggtgtggttgcccggcgt
tcggtggaagtcgggcaggtggtatcggcggggcaaaccgtcttcacccttgccaccgac
ggcgagcgtgaagtgctgatcgacctgccggagcagagtttcggccggttcaagatcggc
cagccggtctcggtcgagctgtggagtcaacccgaccagcgtttcagcgggcgcatccgc
gaactctcgccagccgccgaccccaaatctcgcaccttcgctgcccgtgtcgcgttcacc
gctggcagcgttccggctgagttgggccagagcgcccgggtgtttatccaggccgccgac
aaggtctcactgtcggtgccgttgtcggccctgactgccgagaacggcgccacttttgtc
tgggtgctcaacgccaacaacaccctgaaaaaagtcccggtgcgcgtcggcgccttcggc
gaaaaaaccgttccggtgctggaaggcctgggccccgatgattgggtcgtggcagctggc
gtgcatgtgctcctcgacggccagcaggtgcggccggtggatcgctccaaccgcgtggtc
aacctggcggccaaggagtaa
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