Pseudomonas brassicacearum DF41: CD58_07990
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Entry
CD58_07990 CDS
T03174
Name
(GenBank) ABC transporter
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CD58_07990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbc02000
]
CD58_07990
02044 Secretion system [BR:
pbc02044
]
CD58_07990
Transporters [BR:
pbc02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
CD58_07990
Secretion system [BR:
pbc02044
]
Type I secretion system
Adhesin protein transporter
CD58_07990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_33
Peptidase_C39
RTX
AAA_29
AAA_22
AAA_16
EMP70
MMR_HSR1
DUF87
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AHL32834
UniProt:
W8PG35
LinkDB
All DBs
Position
complement(1755244..1757403)
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AA seq
719 aa
AA seq
DB search
MTSMEPATLGADPRLNFDDPLLDGLLILCKLHGATVSRASLSAGLPMAHQRLSLDLLPRA
AARASLQARLLRRDLGDISPLNLPVMLILAGGRCAVLRRWGEDGKALILPSEADGGEQWV
SREELIANYSGQALFARPRHELEDLRSPLVPRVEAWFRDTLKLSRWLYSDAILASFLINL
LGLMVPLFVMQTYDRVVPNQATSTLWVLAVGLLIGTGFELVLRVVRAHLLDTAGKKTDVI
LSATLFERITGMAMKAKPVTIGGFAQSIHDFQGLREFLTAVTLTSLIDLPFAVLMLLVIG
LLGGWLVVIPVVAFPLTIVFAMIIQVRLRDTVQKSLALGAQRQALLIETLGGLETLKACS
AESERQHQWESTHGALTRLDSHARNLSALATNGTLFLQQLAGMATIVAGVYSIIAGNLSV
GALVATYMLGSRVLAPLGQIAGLITRYQQAQLTMRSTDALMALPQERDAKQRPLDRTQLQ
GGLEVNGVTFHYNGQNAPALANISFSLKPGERVGIIGRSGSGKSTLARLVMGFYAPEEGQ
LLLDGLDLRQLDVADLRQQIGYVAHDLPLLAGSLRDNLTLGARYISDARMLEVAELTGVT
ELARQHPQGFDRPVGERGQLLSGGQRQAVLLARALLLDPPILLLDEPTSAMDNSSEDVLR
QKLHTHVQGKTVLLVTHRTSMLSLVDRLVVLDNGRIVADGPKDAVIDALRKGRVGSAAV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtgaccagcatggaacccgcaacccttggcgccgatccgcgcctgaatttcgacgatcct
ttgctggacggtctattgatcctctgcaaactccatggcgcgacagtcagccgcgccagc
ctcagcgccgggcttcctatggcgcaccaacgcctgagcctggacctgctgcctcgtgca
gcggcccgggccagcttgcaggcgcgattgctgcgccgggacctgggcgacatctcgccg
ctcaacctgccggtgatgctgattctggccggtggccgctgcgcggtgttgcggcgctgg
ggcgaggacggcaaggcactgatcctgcccagcgaagccgatggtggcgagcaatgggtc
agccgcgaggaactgatcgccaactacagcggccaggcgttgttcgcccggccgcgacat
gaactcgaagacctgcgctcgcccctggtgccgcgggtcgaggcgtggtttcgcgacacc
ttgaaactgtcgcgctggctgtacagcgacgcgatcctggcaagtttcctgatcaacctg
ctggggctgatggtgccgctgttcgtcatgcagacctacgaccgcgtggtgccgaaccaa
gccacctctacgttgtgggtgttggccgtggggctgttgatcggcaccggcttcgaactg
gtcctgcgggtggtacgggcccatctgctggacaccgctggcaagaaaaccgatgtgatt
ctttccgccacgctgttcgagcgcatcacgggcatggccatgaaggccaaaccggtgacc
atcggcgggtttgcccaaagcatccacgacttccagggcctgcgggaatttctcaccgcc
gtgaccctcacgagcctgatcgacctgcccttcgccgtgctgatgctgctggtgatcggc
ttgctgggtggctggctggtggtgattccagtggtggcgtttccgctcaccattgtcttc
gcgatgatcatccaggtgcgccttcgcgacaccgtgcaaaaaagcctggccctcggcgcc
cagcgccaggccttattgattgaaaccctcggcggcctggaaaccctcaaggcttgcagc
gccgaaagcgaacgccagcatcaatgggaaagcacccacggcgccctcacccgcctggac
agccacgcacgcaacctctcggcactggcgaccaacggcacgttgttcctgcaacaactg
gccggcatggcgaccatcgtcgccggggtctacagcatcatcgccggcaacctcagcgtc
ggcgcgctggtggcgacctacatgctcggcagccgggtactcgctccgctggggcagatc
gccggactgatcacccgctaccagcaagcccagctcaccatgcgcagcaccgatgccttg
atggcgttgccccaggagcgcgatgccaagcagcggccgctggaccgtacccaactgcag
ggcgggctggaggtcaacggcgtgacgttccactacaacggccagaacgctccggcgctg
gccaatatcagcttcagcctcaagcccggcgagcgggtgggcatcatcggtcgcagtggt
tcgggcaagagcaccctggcacggttggtgatgggtttctatgccccggaggaaggccag
ttgctgctcgatggcctggacctgcggcagctggacgtagccgacctgcgccaacagatc
ggctacgtcgcccatgacctgccgttgctggccggtagcctgcgggacaacctcaccctc
ggcgcccgctatatcagtgacgcgcgcatgctggaagtcgccgagttgaccggggtcacc
gaactggcgcgccagcatccccaaggtttcgaccgcccggtgggcgagcgcgggcagttg
ctttccggtggtcagcgccaggctgtgctgctggccagggccttgctgctcgacccaccg
atcctgctgctggacgagcccaccagcgccatggacaacagcagtgaagacgtcctcaga
caaaaactccacacccatgtccagggcaagacggtgctgctggtgacccaccgaacctcg
atgctcagcctggtggaccggttggtggtgctggacaacggacggattgtggccgatggg
ccgaaggacgcggtcatcgatgcgttgcgcaagggacgggtaggctctgcggcggtttaa
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