Pseudomonas brassicacearum DF41: CD58_14470
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Entry
CD58_14470 CDS
T03174
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CD58_14470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbc03021
]
CD58_14470
Transcription machinery [BR:
pbc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CD58_14470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_11
GerE
HTH_38
HTH_28
DUF2285
HTH_31
HTH_Tnp_ISL3
HTH_36
HTH_17
HTH_29
HTH_7
DUF6362
HTH_24
CHASE3
MA3
HTH_40
Motif
Other DBs
NCBI-ProteinID:
AHL34038
UniProt:
W8PJQ8
LinkDB
All DBs
Position
3197894..3198403
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AA seq
169 aa
AA seq
DB search
MFDAATPTEHSLHALYRDHGGWLEGWLRRRMGNAWDAADLRQDTFLRVLASSQPLTDLHE
PRAYLLTVGKRLLSNFYTRRNLEQAYLDALASLPEDSVPSPEQRWLLLETLQALDELLDG
LPPLVRRAFLWSQLEGLGYREIAERLQVSDRTIKRYMAQAYEHCLLVEF
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacgcagctacgccgacggagcattccctacacgcgctgtaccgtgaccacggc
ggttggctggaaggctggttgagacggcgcatgggcaacgcctgggatgcggcggatttg
cgccaggatacttttctacgagtgctggccagctcccagccgttgaccgatttgcacgag
ccccgtgcctatctgctgacggtcggcaagcggctgctgagcaatttctacacccgacgt
aacctggagcaggcgtatctcgacgccctggcgagcctgcccgaagacagcgtgccgtct
ccggaacagcgctggttgttgctggaaaccctgcaagccctggatgaactgcttgatggc
ctgccgcccctggtgcggcgggcttttttgtggagccagcttgaaggcctgggctaccgt
gaaattgccgaacgcctgcaggtgtccgaccgcaccatcaagcgctacatggcccaggcg
tatgaacattgcctgctggtggagttttga
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integrated database retrieval system
