Pseudomonas brassicacearum DF41: CD58_16420
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Entry
CD58_16420 CDS
T03174
Name
(GenBank) LysR family transcriptional regulator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
pbc
Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbc03000
]
CD58_16420
Transcription factors [BR:
pbc03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CD58_16420
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
MarR_2
HTH_20
HTH_28
HTH_11
HTH_50
HTH_34
HTH_Tnp_ISL3
HTH_IclR
HTH_24
HTH_5
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AHL34383
UniProt:
W8PKJ0
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All DBs
Position
3759357..3760277
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AA seq
306 aa
AA seq
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MIADLPPLNAVRAFAAAARHQSFSRAAEELHVSHSAVSRHVKLLEERLGVSLFERRTRQS
LLTPEGKAFYEQVSEALTQIANAAATLTRRASQRKVTINVRPSFAVRWLIPRLPDFVVLH
PDIKPEVVTSTRAPDPSREPFDVVIRRGHSGWSASVKPTVLLEDDLLLVAAPSLLQNVPL
DSTHDLARHTLLSGKTRSSDWQDWAEHAGNEPLNNLPTLQFDHMHLVLQAAVDGLGVALC
PASLLGRDLSNGRLTCPLPALRLPLSRFYYGVSRDAVGETQVFVDWLFSQIQQNAAAATS
RTDAVF
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccgacctccccccgttgaacgccgtccgcgccttcgccgctgccgctcgccac
cagagcttcagtcgcgcagccgaagaactgcacgtcagccatagcgccgtcagccggcac
gtaaagctgctcgaagagcgcctgggcgtgtcgctgttcgagcgtcgaacccgtcagtct
ttgctcacgcccgaggggaaagcgttttacgaacaagtcagcgaggcgctgacacagatc
gccaacgccgctgccaccctgacccgccgtgcatcccagcgcaaagtcaccatcaacgtg
cgcccgtccttcgcggtgcgctggttgatccctcggctaccggatttcgtcgtgctgcac
ccggacatcaagcctgaagtggtcaccagcaccagggcaccggacccgtcacgggaaccc
ttcgatgtggtcattcgccgtggacattccggctggtcagccagcgtgaagcccaccgtg
ctgctggaagacgacttgttgctggtcgccgcgccatcgttgctgcaaaacgtgccactg
gacagcacccacgatctggcccggcacaccttgctgtcgggcaagacccgtagcagcgat
tggcaagactgggcggaacacgcagggaacgagccattgaacaacctgccgaccctgcaa
ttcgatcacatgcacctcgtgctgcaggccgccgtcgatgggctgggcgtggcgttgtgt
ccggcttcgctgctgggtagggatttgtccaacgggcgcctgacctgtccactgccggcg
ttgcgcctgccgttgtcccgtttctattacggtgtttctcgggatgcggtgggtgaaacg
caggtttttgtggattggttgttttctcagatccagcagaatgcagccgccgcgacatct
agaaccgatgccgttttttga
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