Pseudomonas brassicacearum DF41: CD58_17465
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Entry
CD58_17465 CDS
T03174
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CD58_17465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_4
Cadherin_5
Cadherin_3
Big_11
CshA_repeat
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AHL36901
UniProt:
W8Q429
LinkDB
All DBs
Position
3986056..3995247
Genome browser
AA seq
3063 aa
AA seq
DB search
MLFDGAAAVIADTAVVPRSGAEDAHVAISGVSVSDDTATQHITLNASHGTLSLANTNGLT
GLTGNGGTSISFSGSLADINAALNGMSFAGDQNFNGGASFTLTSDDGSSITSKTISINIT
PVNDAPAITGSGPALQVDEGGSASFSGAINTADGKGFTQANLGLNDVDNVQQQVIVKLTS
LASDGTLLLNGKELGIGSSFSIDQIANLSYRHNGDQVTAPAGLTDTFTITIDDGAGGVLR
DQVVQIHINPVDQAPTSSGTITIIEGEQNVSLTDNGNLITPIGTPRGSIQISDPDQAPGV
DFSYTLDSLPTHGTLFYNGVAITNTGFVINDLSKLTYSHNGSEPSATGTTDSFNLKVTDD
GGGTNVPKTSTLTVNLTLLPNNDDPVLDHSITQTLAPGEMTRVVTSGMLQVTDTDSFSSS
LSYTLTAVPDRNIGYFTLNGGLLVVGSKFTQADVNAGNVVYHVRAYTGAARTDSMSFTVK
DGGVRLYPSSRDGGIYDTDAANSTLTVNTFNVNVPPETVTVPGPIPADPPSNTAPVVGGD
KAATLDEAGTYTLTAADLNTSDDFTAADGLTYRVLVTPGSGTLLVNGVAIGAFGTFTQAD
VNNGLVTFQHSGDEHFVDSFQFSVSDGTLTTVTENFSLNIVPKNDTPTAINDGRVFTAEG
GTVTVTDRNIVVADPDRQGDASGGTQYAATNDVLLQVTVLPQFGHLTLNGVNVTLNQTIT
TVQLAAGDLKYVHDGSENFTDSFTVVPVDDQGVAIAAGTNQSSTGAVLVVPVTISPVNDA
PELSSKSQLIDGEAGAIHEGQAVVIGGSTGYANGDGSGTVNGPVAGAHLVYRDDDNSSVQ
RQYRLTVIPQNGNLLLNGGVLGLGSVFTQADLDAGRVSYQHDGSETSNDSFSYIVSDGDF
SANDNGSFAQGAAATASTYNIEILPTNDKPTVTAPGSPINLDSTTATHNPVGGFVVSDPD
DLGGSPSTPDAVQVIVRLTQTDGTAFTAGDYAGVTLSVGLGGGATRDGDKDGNGDYLVLR
GTRAEVNAALATLSASVNDPSNEDHQYRIQVVVDDRLRDTGGNLIAGANGGLENQAAVPG
GSGQPISAVEFDGYADSVAGTDLNLAQASVLIRVSTINGAPSVAIPASVQINEDRRTAIN
GISVVDTESTAFDIPVSVTVSVPGGQGVLGIAGTGAQTSITLASGRTVTISGDNSNSVTL
VGRADDIQSLLNDASNGLTYTSATNANHDVNGVAAGDVTLSLRIDEGAAAIGGDTGSGSV
APVSQTSQLAITLQATNDAPTVTASGGNLSIGQGGVAVAVTGFAVADPDYSDGGGITAPA
GETNSPEQDFIQVTVRLTNASSVPLNQAAYADIVLGSTSSPTEDHTTFEVDDTHTGTGNA
LVIRGTRANVNAYLAGLQVTLSGSLANTDTSYRVQVIADDRVRDVATGTLDPAGLANGGL
NPSGAAVVGAPTTVINPYAALPGSLTLNMASNTRNLFVSSINNPTNITAGDVTVKEGSAT
LNLTGSVGAFSISDPDANGANTFSATIHVSQGVISAVGGSGGTVGGLGSDTITLTGATQA
QVNARLQALTITYPTAAGAPAGADYTGTFTVTVTVNDGGSIGQRPGALGGDTNDASQNPG
DYAYADASSAQLITTRTINVTVTPVNDAPLASGLSNVQTVTKGGSPIRLDGDGNVTVSDT
ELDVSPGKWLGATLTISRQGASNANDVFGLFDSDTSNDAVGVQVNGNDLIVDGVTVGTLS
NASGSLQVTFNGTADRSVVGKVMGAVTYSNTNPSTSASADVQVDFVLNDQNPNTADSGTA
GSGQDQGAEGQKNTTRSITVHLNTVPLAADDGLQTVQQGNPASGNVLSNDTDPEGNVLSV
TGFTLNGIAGSFNPGDTATLTGVGTFTLNANGSYLFTPLSTYHGDVPVVTYSLSDGTGGT
DSADLSIRVNAPPVAVDDGLQTIQQGDPASGNVLPNDSDPEGNALSVSGFTITGVAGSFN
PGDTATITGVGSLTLNADGSYLFTPLSTYHGDVPVVTYNLSDGVGGTDSANLTIRVNAPP
VAVDDGLHTVQQGDPASGNVLPNDSDPDGNALSVTGFTITGVAGSFNPGDTATLTGVGTL
TLNADGSYLFTPLSTYHGNVPVVTYSISDGVGGTDSADLSIRVNAPPVAVDDGLQTIQQG
DPASGNVLPNDSDPVGNALSVSGFTITGVAGSFNPGDTATITGVGTLTLNADGSYLFTPL
STYHGDVPVVTYGLSDGAGGTDSANLSIRVNAPPVAVDDGLQTVQQGDPASGNVLPNDSD
PDGNALSVTGFTVNGVAGSFSPGDTATITGVGTLTLNADGSYLFTPLSTYHGDVPVVTYG
ISDGVGGTDSADLSIRVNAPPVAVDDGLQTVQQGHPASGNVLPNDSDPDGNALSVSGFTI
NGVSGSFNPGDTATITGVGSLTLNADGSYLFTPLSTYHGDVPVVTYGISDGLGGTDSATL
TIRVNAPPVAVDDGLQTVQQGDPASGNVLPNDSDPEGNALSVTGFTITGVAGSFNAGDTA
TLAGVGTLTLNADGSYLFTPLSTYHGNVPVVTYSISDGAGGTDSANLTIRVNAPPVAVDD
GLQTVQQGDPASGNVLPNDSDPEGNALSVSGYTIAGVSGSFNPGDTATITGVGTLTLNAD
GSYLFTPLSTFHGDLPVVTYSLRDGKGGTDSADLTIRVNPKPIANDDGVLLTDRDTPIRS
INVLGNDTDPNGSPLTVTHATSPDGSVSINPDGTLDFTPAAGVTGDVLITYVISDGLGGS
DTAQVRIHINEPPVALNDGVQTGLQGEPINGSVLGNDSDPENDTIHIVDFTINGVTGTHA
AGNSVVIAGVGTFTLARDGSYRFVPNTNYLGAVPTINYRITDDHGGFSTAQLQLRIDSSV
LPQPPASGMTPDQHLPPTGVDRYDYPDRHLDLASVQRSMVPGLFVTLPVMDSQAQTHDRL
DPLLSGYNAAISGQMQSESIGLGLGFVPDLHVTLAVQNSQETVDDQERSLKFKDSAYFTG
GDSLFDDFNTWVPRVNEVSADDVASPLPKTAVAFSEQVKKAAAERHPHLFSENKPSPAPQ
SKG
NT seq
9192 nt
NT seq
+upstream
nt +downstream
nt
atgctttttgacggtgcggcggctgtcattgccgataccgccgtcgtgccgcgcagcggt
gccgaagatgctcatgtagcgatcagcggcgtcagtgtcagcgatgacaccgccacacag
cacatcaccttgaatgccagccacggcacgttgagcctggcgaacaccaatggccttacc
gggctgacgggcaacggcggcacaagtatcagcttcagcggctccctggcggacatcaac
gccgccctcaacggtatgtcgttcgcaggcgaccagaatttcaatggtggtgcctcgttt
accctgaccagcgatgacggcagcagtatcaccagcaagaccatcagcatcaacataacc
cccgtcaacgacgcacctgcgattaccggcagcggcccggcgttgcaagtggacgaaggt
ggctccgcgagtttctccggggcaatcaacaccgcagacggcaaaggtttcacccaggcc
aacctgggtttgaacgatgtcgataacgtgcagcagcaagtcatcgtcaaactcacgtca
ttagccagtgacggcaccttgctgctcaacggcaaggaattgggcatcggttcgagtttt
tccatcgatcagatcgccaacctgagctatcgccacaacggcgaccaggtcaccgcccct
gccggcctcaccgacaccttcaccatcaccatcgatgacggtgccggtggcgtcctccgc
gaccaggtcgtacagattcacatcaacccagtcgatcaggcgcccacatcgagcggcacg
atcaccattatcgagggtgagcagaacgtcagcctcaccgataacggcaacttgatcacg
cccattggcaccccacgcgggtccattcagatcagcgatccggaccaggcccctggtgtc
gatttcagctatacgctggattccctgccgacccatggcacgctgttctacaacggtgtg
gcgattaccaataccgggttcgtcatcaacgacctgagcaagctcacctacagtcacaac
ggcagcgagcccagcgcaacgggcacgactgacagcttcaacctcaaggtcaccgacgac
ggcggcggcacgaatgttccgaaaacctcgacgctgaccgtcaacctgactctcctgccc
aataacgacgatccggtcctggaccacagcattacccagaccctggcccccggcgaaatg
acacgggtagtcaccagcggcatgttacaggtcaccgacaccgactctttctcgtccagc
ctgagttacacgctcaccgcggtgcccgacaggaacattgggtatttcaccctcaacggt
ggcctgctggtggtcgggtcgaaattcacccaggccgacgtcaatgccggcaacgtggtc
taccacgtccgcgcctacaccggtgcggcgcgaaccgacagcatgagtttcacagtcaag
gacggcggcgttcgcctgtatccaagctcacgggatggcggcatctacgacaccgacgcc
gccaacagtacgttgacggtcaataccttcaacgtcaacgtgccgcccgagaccgtgacc
gttcctggcccgatccccgccgatccaccgtccaataccgcgcccgtcgtcggtggcgac
aaggccgcgacgcttgatgaagccggcacttacacgctgaccgccgccgacctgaatacc
agtgacgatttcactgcggccgacgggctgacctaccgcgtccttgtaacaccgggcagc
ggcaccctgctggtcaatggtgtcgccatcggcgccttcggcacgttcactcaagccgac
gtgaacaacgggcttgtgacgttccagcacagcggcgatgaacacttcgtcgacagcttc
cagttctcggtctccgacggcacgttgaccaccgtgaccgagaacttcagcctgaacatt
gtgccgaagaacgacacgcccactgccatcaacgatggtcgggtattcaccgccgaaggc
ggcaccgtcaccgtcaccgaccgcaatatcgtggtcgccgacccggacaggcaaggcgat
gccagcggcggcacccaatacgccgcgaccaacgatgtgctgctgcaagtcaccgtgctg
ccgcagttcggtcatctgactttgaacggcgtgaacgtcacgttgaaccagacgatcacc
acggtgcaactcgctgcgggcgatctgaaatatgtccatgatggcagcgaaaacttcacc
gacagttttaccgtcgtaccggtcgacgatcagggcgtagccatcgcggccggcaccaat
caatcgagtaccggcgcggtcctggtcgtaccggtcaccatttcaccggtcaatgatgcg
cctgagttgagctcaaaatcccagttgatcgatggtgaggccggcgctatccacgaaggt
caagccgtcgtgattggtggctccaccggctacgccaatggcgatggctcagggaccgtg
aatggcccggtggcgggtgcacacctggtctatcgcgacgacgacaactcgagtgtgcag
cggcagtaccgactcaccgtaatcccgcaaaacggcaacctgctgctcaatggcggcgtg
ctggggcttggctcggtgttcacccaggccgatctggacgccggccgtgtctcctatcag
cacgacggcagcgaaaccagcaacgactccttctcctacatcgtcagtgatggtgatttc
agcgcgaacgataacggctcgtttgcccagggcgctgcagccactgcatcgacctacaac
atcgaaatcctgccgaccaacgacaagccaacggtgaccgcccctggcagtcccatcaac
ctcgacagcaccaccgccacccacaatccggtcggtggcttcgtggtgagcgacccggat
gacttgggcggcagccccagcacaccggatgcggtgcaagtcatcgtgcgcttgacccag
actgacggcacggcctttacggcgggcgactatgcgggtgtgaccttgtcggtcggcctc
ggcggcggcgctactcgcgatggcgataaagacggcaatggcgattacctggtgctgcgc
ggcacgcgcgccgaggtcaacgcggcattggcgaccctcagcgccagcgtcaatgacccc
agcaacgaagatcatcaataccgcatccaggtcgtcgtcgatgaccgcttgcgtgacacc
ggcggcaacctgatcgccggtgccaatggcggcttggaaaaccaggcggcagtcccgggt
ggcagcgggcaacccatatccgccgtggaattcgacggctatgccgacagtgtcgccggc
acggatctcaaccttgcccaggccagcgtgttgattcgcgtctccaccatcaatggcgcg
cccagcgtagccattccggcttccgtgcagatcaacgaagaccgtcgaactgccatcaat
ggcatctcggtggtggacaccgagtccacggcgttcgacatccctgtctctgtcaccgtc
agtgttccaggggggcaaggcgtgctggggatcgccggcaccggcgcacaaacgtccatt
accctggcctcagggcgtaccgtcaccatcagcggagacaacagcaacagcgtgacgctg
gtcgggcgcgccgacgatatccagtcgctgctcaacgacgccagcaacggcttgacgtac
accagtgcaaccaatgccaaccatgacgtcaacggcgtggcggcgggcgatgtcacgctc
agtctgcgaattgacgaaggcgccgccgccatcggcggtgacacgggcagcggcagcgtc
gccccggtgtctcagacaagccaactagccatcaccctgcaggcaacgaacgacgcgcct
acggtcacggcaagcggtggcaacctgtcgatcggccaagggggtgtagccgtagccgtg
accggtttcgctgtcgccgatccggactacagcgacggcggtggcattaccgcgcccgcc
ggtgaaaccaattcacccgaacaggatttcatccaggtcaccgtgcgtctgaccaacgcc
agcagcgtcccactgaaccaggcggcgtatgccgacatcgtgctcgggtcgaccagttca
ccgaccgaagaccacaccacgttcgaggtcgatgacacccacaccggcactggcaacgcg
ctggtgatccgtggcacccgggccaatgtcaacgcctacctcgccgggctccaggtcaca
ctcagtggcagcctcgccaacacagacacaagctacagggtccaagtgatcgccgatgat
cgcgtgcgtgacgtggcgactgggacgctggatcctgccggcctggccaacggcggcttg
aatccgtcgggcgccgcagtggtgggcgcgcccaccaccgtgatcaatccctatgctgcc
ttgcctggctctctgacgctcaatatggcgagcaacacgcgcaacctgttcgtctccagc
atcaacaacccgaccaacattaccgcgggtgatgtcacggtcaaggaaggctcggcgacc
ctgaacctgaccggcagcgtgggcgcgttctcgatcagcgacccggatgccaacggcgcc
aacaccttctctgcaaccattcacgtcagccaaggcgtcatctctgccgtgggcggcagc
ggcggtaccgttggcggacttggcagcgatacgatcacgctcacaggtgccacccaagcc
caggtcaatgcacgcttgcaagccttgaccatcacctatccgaccgctgcgggcgcgccg
gcgggagccgactacacgggcaccttcactgtaacggtcaccgtcaacgatggcggcagc
atcggtcagcgccccggtgccctgggcggcgacaccaacgatgccagccagaaccccggt
gattacgcttacgcggatgcctccagcgcccagttgatcaccacccgcacgatcaatgtg
acagtgacccccgtcaatgacgcgccgctggcctcagggctgagcaatgtccagacagtg
accaaaggtggcagccctatccgcctggacggcgatggcaacgtgaccgtcagcgatact
gagctggatgtgagtccgggcaaatggctgggcgcgaccctgaccatcagccgtcagggc
gccagcaatgccaacgatgtctttggtctcttcgacagcgacaccagcaatgacgcggtc
ggcgtccaggtcaatggcaacgacctgatcgttgacggcgtgacggtcggcaccctcagc
aatgcctcgggcagtttgcaggtcaccttcaatggcactgccgaccgctcggtagtcggc
aaggtcatgggcgcggtgacctacagcaacaccaacccttcgacgtccgccagtgccgac
gtgcaagtcgatttcgtcctcaatgaccagaacccgaacaccgccgacagtggcactgcc
ggtagcggtcaggaccagggggccgaaggccagaagaatacgacccgttcgatcaccgtc
cacctcaataccgtaccgctcgccgccgatgacggtttgcaaaccgtccagcaagggaac
ccggccagcggcaacgtgctgtccaatgacaccgatccggagggcaatgtcctcagcgtg
acggggttcaccctcaatggcatcgccggcagcttcaaccctggcgacaccgcgaccctt
accggcgtcggcaccttcaccctgaatgccaacggcagctacctgttcacgccgctgtcg
acctatcacggcgatgtaccggtggtgacctacagcctcagcgatggcacgggcggcact
gacagcgccgacttgagcatccgcgtcaatgcaccgcccgtggcggtggatgacgggctg
caaaccattcaacagggtgatccagccagcggcaacgtgttgcccaacgacagcgatccg
gagggcaatgccctcagtgtcagtggattcaccatcactggcgtcgccggtagcttcaac
cctggcgataccgcgacgattaccggtgtcggcagcctcaccctgaatgccgacggcagc
tacctgttcacgccgctgtcgacctatcacggcgatgtaccggtggtgacctacaacctc
agcgacggtgtgggcggcactgacagcgccaacctgactatccgcgtcaacgcaccaccc
gtggcggtggatgacggtctgcacaccgttcagcaaggtgatccggccagcggcaatgtg
ttgcccaacgacagcgacccggacggcaatgccctcagtgtcacgggcttcaccatcact
ggcgtcgccggcagcttcaacccgggcgacaccgcaacccttaccggcgtcggcaccctc
accctgaatgccgatggcagctatttattcacgccgctgtcgacctatcacgggaatgtg
ccagtggtgacctacagcatcagcgacggtgtgggcggcactgatagcgccgacttgagc
attcgcgtcaatgcgccacccgtggcggtggatgacggcctgcaaaccattcaacagggt
gatccagccagcggcaacgtgctgcccaacgacagcgacccggtgggcaatgccctcagc
gtcagcggatttaccatcactggtgtcgccggtagcttcaatcctggcgacaccgcaacg
attaccggcgtcggcacccttaccctgaatgccgatggcagctatttattcaccccactg
tcgacctatcacggcgatgtaccggtggtgacttacggcctcagcgatggcgcaggcggc
actgacagcgccaacctgagcatccgcgtcaatgcaccgcccgtggcggtggatgacggc
ctgcaaaccgttcagcaaggtgatccggccagcggcaacgtgctgcccaacgacagcgac
ccggatggcaatgccctcagtgtcacgggtttcaccgtcaatggcgttgccggtagcttc
agccctggcgacaccgcaacgattaccggcgtcggcaccctcaccctgaacgccgatggc
agctacctgttcacgccgctgtcgacctatcacggcgatgtaccggtggtgacctatggc
atcagcgatggcgtgggcggtactgacagcgccgacttgagcatccgtgtcaacgcgcca
cccgtggcggtggatgatggtctgcaaaccgttcagcaaggtcatccggccagcggcaac
gtgttgcccaatgacagcgacccggatgggaatgccctcagtgtcagcggatttaccatc
aatggcgtcagcggcagcttcaaccctggcgataccgcgacgattaccggcgtcggcagc
ctcaccctgaatgccgacggcagctacctgttcaccccgctgtcgacctatcacggcgat
gtgccggtggtaacgtacggcatcagtgatggcctggggggtaccgacagcgccaccttg
accatccgcgtcaacgcgccacccgtagcggtggatgatggcctgcaaaccgttcagcaa
ggtgatccagccagcggcaatgtcttgcccaacgacagcgacccggagggcaatgccctc
agtgtcacaggcttcaccatcactggcgtcgccggcagttttaacgctggcgacaccgcg
acccttgccggcgtcggcaccctcaccctgaatgccgatggcagctacctgttcacgccg
ctgtcgacctatcacgggaatgtgccggtggtgacctacagcatcagcgacggcgcgggc
ggcactgacagcgccaacctgactatccgcgtcaacgcgccacccgtggcggtggatgat
ggcctgcaaaccgttcagcaaggtgatccggccagcggcaatgtcttgcccaacgacagc
gatccggaaggcaatgccctcagcgtcagcgggtataccatcgccggcgtcagcggcagc
ttcaaccctggcgacaccgcgacgattaccggcgtcggtaccctcaccctgaatgccgac
ggcagctacctgttcaccccgttgtcgaccttccacggtgatctaccggtggtgacctac
agcctccgcgatggcaagggcggcactgatagcgccgacctgacgatccgggtcaacccc
aagccaattgccaacgacgacggtgtcttgctgacggaccgcgacacaccgatccggtcc
atcaatgtgctgggcaacgacaccgatccgaacggctcgccactcaccgttacccacgcc
acaagcccggacggcagcgtctcgatcaaccccgacggcactctggatttcaccccggca
gccggtgtgacgggagatgtgctcattacctacgtgatcagtgacggtctcggcggcagc
gacaccgcccaggttcgaatccatatcaacgagccccccgtggcgctcaatgacggtgtc
cagaccggacttcaaggcgagcccatcaacggcagcgtgttgggcaacgacagcgaccca
gagaacgatacgattcacatagtcgacttcactattaatggggttaccggcacccatgcg
gccggtaacagcgtggtgatcgccggcgtcggtacctttaccctggcgcgcgacggcagc
tatcgattcgtgccgaacaccaactatcttggcgcggtaccgacgatcaattaccggata
accgacgatcatggcggcttctccacggcacaactgcagctgcgcatcgattcttcggtg
ttaccgcaaccgccggcctccggaatgaccccagatcaacacttgccaccgacaggcgtg
gaccgctacgactatccggaccgacacctggacctggcgagtgtgcagcgttcgatggtg
cccggcttgttcgtcacgctgccagtgatggactcccaagcccagacccatgaccgactc
gacccccttttgtcaggctataacgctgccatcagcgggcaaatgcaatcggagtcgatt
ggcctggggctcggcttcgttcctgacctgcacgtcacactggcggtacaaaactcgcaa
gaaaccgttgatgaccaagagcggtcgctcaaattcaaggacagcgcatatttcaccggt
ggcgacagtttgttcgatgacttcaacacctgggtaccccgcgtcaacgaagtttccgcc
gatgacgtcgcctcccctctacccaagaccgccgttgctttcagtgagcaagtgaaaaag
gccgccgccgagcgccatcctcatttgttcagtgaaaacaaaccgtcacccgcaccgcaa
agcaaaggctga
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integrated database retrieval system