Plasmodium berghei: PBANKA_0314700
Help
Entry
PBANKA_0314700 CDS
T01111
Name
(RefSeq) replication factor C subunit 2, putative
KO
K10755
replication factor C subunit 2/4
Organism
pbe
Plasmodium berghei
Pathway
pbe03030
DNA replication
pbe03410
Base excision repair
pbe03420
Nucleotide excision repair
pbe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PBANKA_0314700
03410 Base excision repair
PBANKA_0314700
03420 Nucleotide excision repair
PBANKA_0314700
03430 Mismatch repair
PBANKA_0314700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbe03032
]
PBANKA_0314700
03036 Chromosome and associated proteins [BR:
pbe03036
]
PBANKA_0314700
03400 DNA repair and recombination proteins [BR:
pbe03400
]
PBANKA_0314700
DNA replication proteins [BR:
pbe03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PBANKA_0314700
DNA Replication Termination Factors
ELG1-RFC complex
PBANKA_0314700
Chromosome and associated proteins [BR:
pbe03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PBANKA_0314700
DNA repair and recombination proteins [BR:
pbe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PBANKA_0314700
Check point factors
HRAD17(Rad24)-RFC complex
PBANKA_0314700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_30
AAA_19
AAA_22
RuvB_N
SLFN-g3_helicase
DUF2247
AAA_11
DEAD
AAA_14
AAA_23
nSTAND3
AAA_assoc_2
AAA_16
ResIII
AAA_28
bpMoxR
AAA_5
AAA_2
KTI12
FtsK_SpoIIIE
RNA_helicase
AAA_7
AAA_18
AAA_24
Viral_helicase1
PIF1
Mg_chelatase
ATPase_2
RsgA_GTPase
T2SSE
DUF815
SNF2-rel_dom
TniB
VapE-like_dom
AAA_33
Gp44_lid
Motif
Other DBs
NCBI-GeneID:
55148069
NCBI-ProteinID:
XP_034420030
LinkDB
All DBs
Position
3:512508..513500
Genome browser
AA seq
330 aa
AA seq
DB search
MSNLPWVEKYRPKKLDDIVHQTNAISMLKEVIKTKNMPHLIFHGPPGTGKTSAINALAHE
LFGKENINERVLELNASDDRGINVVREKIKAYTRISISKNKINTETNEQLPPWKLVVLDE
ADMMTEDAQSALRRIIEIYSNVTRFILICNYIHKISDPIYSRCSCYRFQGIPINIKKEKL
LYICKNENIDISDNALSKIIETTQGDLRRAVSVLQLCACIDSKITVDSVLDVSGLPGNDV
ILKIVNSCKMKNFKILEKTIQDIIEDGFDVSYIFKALNEYFVMSQDINDSIKYQILMELS
RHDFRLHNGATKYIQLMSFASSVHSLLNQA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacttaccatgggtagaaaaatatagaccaaaaaaattagatgatattgttcat
caaacaaatgcaatatcaatgttaaaggaagttataaaaaccaaaaatatgcctcatcta
atatttcatggtccccccgggacagggaaaacatcagcaataaatgcattagctcatgag
ctttttggaaaagaaaatattaatgaacgtgttttagaattaaatgcatctgatgatcgt
ggtattaatgtagttcgtgaaaaaataaaagcatatacaagaataagtataagtaagaat
aaaataaatactgaaacgaatgagcaattaccaccatggaaattagttgttttagatgaa
gcagatatgatgacagaagacgcccaatcagctttaagacgaataatagaaatatattca
aatgtaacaagatttatattaatatgtaattatattcataaaatatcagatcctatttat
agtagatgttcatgttatagatttcaagggataccgataaatataaaaaaagagaaatta
ttatatatatgcaaaaatgaaaatatcgatatttcagataatgcattaagtaaaataatt
gaaacaactcagggagatttgagaagagcagtttctgttttacaattgtgtgcatgtatt
gattctaagattacagtggattctgttttagatgtatctggattacctggcaatgatgtt
atattaaaaatagtaaattcgtgtaaaatgaaaaattttaaaattttagaaaaaacaatt
caagatataattgaagatggttttgatgtatcttatatttttaaagcgttgaatgaatat
tttgttatgtctcaagatattaatgattctattaaatatcaaatattaatggaattatct
cgacacgattttcgtttacataacggtgctacaaaatatatccaacttatgagttttgca
tcttcagtccattcattactgaatcaagcataa
DBGET
integrated database retrieval system
