Plasmodium berghei: PBANKA_1108300
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Entry
PBANKA_1108300 CDS
T01111
Name
(RefSeq) pre-mRNA-processing ATP-dependent RNA helicase PRP5, putative
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pbe
Plasmodium berghei
Pathway
pbe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PBANKA_1108300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbe03041
]
PBANKA_1108300
Enzymes [BR:
pbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PBANKA_1108300
Spliceosome [BR:
pbe03041
]
Complex A
U2 snRNP components
U2 related factors
PBANKA_1108300
Complex B
PBANKA_1108300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
55150445
NCBI-ProteinID:
XP_034422292
LinkDB
All DBs
Position
11:320699..324694
Genome browser
AA seq
1331 aa
AA seq
DB search
MSSDSEDYYYKINNNNNSRKKRKEIEENRLKKSKRHYDETYNRKDNDYNKEKHKEKIKDY
EKEIYNRHKKNKYNGYEERERKDYYDRRSVESYKSSHVKNYGKKKYDEKDKYEFKKSERE
KKRHKKDESDECERYEELKYNKKKNDEKIKKKEKKNYHYTSSDESYRKTEKYHDKKRSHG
RSGSNIMDNDSNKNIEGKPSNENKAKEKLNKNKKMEKNCEHKSTESEQEMKSEVKDEVKS
ASAMKPIPETKSLSRLERLKLFAQKLKWGSSENVKKGTKFTLNAPKIKGVNNQINLDIFM
GNDIEEEEEKDEKKTNLVDAYIEREAKIPNDMLKDIKEEMEENIDDPLEIFMKNIEKENL
ENQEIYENKTITLDEIYSYDMNKHKYEDTCYVQAENEEIKEGNMDKEKEDEKRNTNSQIN
KSKLENNKEGNEEDDKMNDDVNENEEEDFYKIFIETLKKKTEEDKKKKEENEEKERIKNE
EKEQNELDDSSINLSEDSEYNCETNTLKKKINKKFLQVNHDEIDYLPIKKNVYVQVSEIT
NMTEKDVEMFRKNNGNIVVRGKNCPRPIQYFYQCGLPGKILNILEKKNFKKMFSIQMQAI
PALMCGRDIIAIAETGSGKTISYLFPLIRHVLHQDKLRNNDGPIGIILTPTRELSIQVKN
EASIYCKAVDLKILAVYGGSNIGAQLNVLKKGVEIIVGTPGRIIDILTISNSKVTNLNRA
SFIVLDEADRLLDLGFESQIHSILNNCRKDKQTAMISATFPNYIQNLAKKLLYKPIEIIV
GEKGKTNNNIYQFVEVLEEKKKLFRLLKLLGEWIKYGLILIFVNKQLEADLLYLELFKYE
YKTLVLHGGQDQSDREHTLKSFKDEQNKILIATSVMARGIDIKNIILVINYECPDHIEDY
IHKIGRTGRSNNIGYAYTFITPNEHTKAYDIYNLIKNNIYYINKTIDIPIELEHMANEYM
NSKITEKDGNKLNTSNGVSNYTTVNSISYHGGDKKKGYKGKGFKFTPNEKSRMQMDKDLA
KKELGLIEEKEDEDREAGYRSDMENDGKINSNTLNKTENITQTHEGKKIKNIPGITKAQK
NNEINISPQTNLKQIELEIQKIKMDDTMNLSLKAKKINELMKAHNFIELQQSSYKTVDST
NDEELDKMAEIESLKLTEHIKDPKEKQLMFQKTKEDVKKKLINSKAQIESRNESIQRNML
LNAIRTKNMKKYSPFLPHTYVTEDNTILEEFYINDYPQHVRLKISNRDVLARIQDMSGAM
CQIKGQYSNPLQPNKTNFILDHKLLHIEITAPTYNQVQIARTELTSLLSMFMQKCNLKNQ
KPSAGGYATFR
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcgattctgaagactattattataagataaacaataataataatagtagaaaa
aaaagaaaagaaatcgaagaaaatcgattaaaaaaaagtaagaggcactatgatgaaaca
tataatagaaaggacaatgactataataaggaaaaacacaaagagaaaataaaagattac
gaaaaagaaatatataatcgtcataaaaaaaataaatataatggttatgaagaaagagaa
aggaaagattattatgatagacgaagtgtcgaatcatacaaaagtagtcatgtaaaaaat
tatggaaaaaaaaaatatgatgaaaaagacaaatatgagtttaaaaaaagtgaaagggaa
aaaaaacgccataaaaaagatgaaagtgatgaatgtgaacgatacgaagaactgaaatat
aataaaaaaaaaaatgatgaaaaaattaaaaaaaaagaaaaaaaaaattatcattacaca
tctagtgatgaaagttatagaaaaacagaaaaatatcacgataaaaaaagaagccatgga
agaagcggaagtaatataatggataatgacagcaataaaaatattgaaggtaagccttca
aatgaaaataaggcaaaagagaaactaaacaaaaataaaaagatggaaaaaaactgtgaa
cataaaagtacagaaagtgaacaagaaatgaagagcgaagttaaggacgaagttaagagc
gcaagcgcaatgaaaccgatacccgagacgaaaagtctcagcagattagaaaggctaaaa
ttatttgcccaaaaactaaaatggggaagtagtgaaaatgtaaaaaaaggaacaaaattt
acacttaatgctccaaaaataaaaggagtgaataatcagataaacttagatatattcatg
gggaatgatatcgaagaagaggaggaaaaggatgaaaaaaaaacaaacttagtagatgca
tacattgaaagggaagccaagataccaaacgacatgttaaaggacataaaggaagagatg
gaagaaaatatagatgatccactggaaatatttatgaaaaatatagaaaaagaaaattta
gagaatcaagaaatatatgaaaataagacaataactcttgatgaaatttatagctatgat
atgaacaaacataaatatgaagatacatgttatgttcaggctgaaaatgaagaaataaaa
gaaggaaacatggataaagaaaaggaagacgaaaaaaggaacacaaattctcaaattaat
aaatccaaattagagaataataaagaaggaaacgaagaagatgacaaaatgaacgacgat
gtgaatgaaaatgaagaagaagatttttacaaaatttttattgaaacgctcaagaaaaaa
acagaagaagataaaaaaaaaaaggaagaaaacgaagaaaaggaaagaataaaaaatgaa
gaaaaagagcaaaatgaattggatgattcttctataaatttaagtgaagatagtgagtat
aattgcgaaacaaatactttaaaaaaaaaaatcaacaaaaaatttctacaagtaaatcat
gatgaaatcgattatttacctattaagaaaaatgtttatgtacaagttagtgaaattaca
aatatgacagaaaaagatgttgaaatgtttagaaaaaataatggaaatatagttgtaaga
ggaaaaaattgtccccgacctattcaatatttttatcaatgtggattacctggaaaaatt
ttaaatatattagaaaaaaaaaattttaaaaaaatgtttagtatacaaatgcaagcaata
cccgcattaatgtgtggtcgagatataattgcaatagcagaaactggaagtggaaaaaca
atatcttatctatttccattaatcagacatgtattacatcaagacaaattaagaaacaat
gatggacccattgggattatacttacccctactagggaattaagtattcaagttaaaaat
gaggcaagtatatattgtaaggctgttgatttaaaaatattagcagtttatggtggatca
aatattggtgcacaattaaatgtattaaaaaaaggtgtcgagataattgtcggaactcct
ggaagaataattgatatattaacaataagtaatagtaaagttacaaatttaaacagggca
tcttttatagttttagatgaagcagatagattgctagatctcggatttgaatcacaaatt
catagtattttaaataattgtagaaaagataaacaaactgctatgatatctgcgacattt
cctaattatattcaaaatttagcaaaaaaactattatataaacctatagaaataatagta
ggagaaaaaggaaaaacaaataataatatatatcaatttgttgaagttttagaagaaaaa
aaaaaactatttcgtttactgaaattattaggagagtggattaaatatggacttatttta
atatttgttaacaaacaattagaagctgatttattatatttagaattatttaaatatgaa
tataaaacattagtgttacatggtgggcaagatcaatcagatcgagaacatacgttaaaa
agttttaaagatgaacaaaataaaatattaattgcaacatctgttatggctagaggaatt
gatattaaaaatattattttagtaattaactatgaatgcccagatcatattgaagattat
atacataaaattggaagaacggggagatcgaataatataggatatgcatatactttcatt
accccaaatgagcacacaaaagcttatgatatttataatttaattaaaaataatatatat
tatataaacaagacaatagatattcccattgagttagaacacatggctaatgaatatatg
aacagtaaaataacagaaaaagatggaaataaactcaatacatctaatggtgtttcaaat
tataccactgttaattctatatcttaccatgggggggataagaaaaagggatataaagga
aaagggttcaaattcacaccaaatgaaaaatcaagaatgcagatggataaagatttagca
aaaaaagaactcggattaatagaagaaaaagaagatgaggatagagaagcaggatataga
tcagatatggaaaatgatgggaaaataaattcgaatacacttaataaaacagagaatatt
acccaaactcacgaaggaaagaaaattaaaaatataccaggaataactaaagcacaaaaa
aataatgaaataaatatatcaccacaaacaaatcttaaacaaatagaattagaaattcaa
aaaataaaaatggatgatactatgaatttatcactaaaagcaaaaaaaataaatgaacta
atgaaagctcataattttattgaattacaacaaagtagttataaaacagtggatagtaca
aatgatgaagaacttgataaaatggcagaaatagaaagtttaaaattaactgagcatatc
aaagatccaaaggaaaaacaattaatgttccaaaaaacgaaagaagatgttaaaaaaaaa
ttaataaatagtaaagctcaaattgaatcaagaaatgaaagtatacaaaggaatatgctt
ttaaatgctataagaacaaaaaatatgaaaaaatattctccatttttacctcatacatat
gtaactgaggataatactattttagaagaattttatattaatgattaccctcagcatgtg
cgtttaaaaatttctaatcgggatgtcttggcacggatacaggatatgtctggagccatg
tgccaaattaaagggcaatattctaaccctttacaaccaaataaaactaatttcatattg
gatcacaaattgttacatattgaaattaccgcccctacttataatcaggtgcaaattgct
cgaacagaattaacttcccttcttagcatgttcatgcaaaaatgcaacctaaaaaatcaa
aagccaagcgcagggggatatgctacatttcgatga
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