Plasmodium berghei: PBANKA_1457500
Help
Entry
PBANKA_1457500 CDS
T01111
Name
(RefSeq) RNA polymerase II transcription factor B subunit 2, putative
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
pbe
Plasmodium berghei
Pathway
pbe03022
Basal transcription factors
pbe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PBANKA_1457500
09124 Replication and repair
03420 Nucleotide excision repair
PBANKA_1457500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbe03021
]
PBANKA_1457500
03400 DNA repair and recombination proteins [BR:
pbe03400
]
PBANKA_1457500
Transcription machinery [BR:
pbe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PBANKA_1457500
DNA repair and recombination proteins [BR:
pbe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PBANKA_1457500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
55152616
NCBI-ProteinID:
XP_034424402
LinkDB
All DBs
Position
14:complement(2205786..2208575)
Genome browser
AA seq
929 aa
AA seq
DB search
MVKARKNIENMEIYDYMKEMDEKVWEYLFDDSLAHETIFSSLNELEQIIISRLLFIQQVV
SERAMRLWINPNFLKKLSESIKNLVDVKILVESETKKDNYNQYKINDRFRLTLLNKIYQN
DKNNICIFNNNIKLQLSKENELYEKKLFPTKEGILCYANTRWNTLLHFIASPNLNSYKYS
HSYSGSYASTYPQCSSIHGGIESPIKTEVGTSLDVNNIHSYGGEYSYNNSLKSVKMEKGN
YYGIQTKKSKKNNEGSDEEYQPYGDEMYDDENYGNESFSQRRKYKNYGEYENMGNNSEYD
EDETNEQYDNSLYPQDKEIRNKYSQNYNDIENSNSGKYLNTRMGNKENVNLYDPNKKIDG
RRGRKKKKGVYAYKQNNLYYKSLQSRENNNMEEENNDFFFSSSNIKKEDLLTCAPCGSLI
EVLKKKKFILDDINNSANIANNNSNNKTINMSREAFSWFLKDIRSRIISLVIEYLLIIDD
GNVTNIAKQNSAKYKKKNNSENVISSDGNEALENSSITNTLINDFNNNDNMNNNNNNNNN
MNGGEWDTNNEDMNNADGVNINIKDTHDYITDPNKNSQKSEIYVKETLLLILSLTQCNIG
QPIFLENLTKAQKEFVDFGIHIGLFLKTHDSYIFITPYALLLTINNLNVENYISILNHLS
VEKFCEESGYNNNDDENIKKKAKLSEIYFHKYLLLQNTARVKNEPLIDEDEKKKLKKIET
KNFISQDITNHNIHSEKRLNENDNLEIGLIIQSNFKVYLYTSSILKINILSHLCELQART
PNMVVGILTRRSVLNAYNSDITADQIIKFLESYSHPGKTKLKSIIPINVITQLKLWEAER
HRLILEDSIVFKNFEKEYLPHLYQQIVIWANSKNYLLHYTPWPKNTNSTEFDTWMKAEKY
LCCIYESKNEIIDKIKEIRGKLMKKRQAI
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggcacgaaagaatattgagaatatggaaatatatgattacatgaaggagatg
gatgaaaaagtatgggaatatttgtttgatgattcactagcacatgaaacgatatttagc
tcactaaatgaattagagcaaattataatatctaggctattgtttattcaacaagtagtt
tcagaaagagctatgagattgtggataaatccaaactttttgaaaaaattaagtgaaagt
ataaaaaatttagttgatgttaaaatattagttgaaagtgaaacaaaaaaagataactat
aaccaatataaaataaatgatcgattcagattaacattattaaataaaatatatcagaat
gataaaaataatatttgtatatttaataataatataaaactacaactaagtaaagaaaat
gaattatatgaaaaaaaattatttcctacaaaagaaggtattctatgttatgctaataca
cgatggaatactctcttacattttattgcttcaccaaatttgaatagttataaatatagc
catagttatagtggtagttatgctagtacatacccacaatgtagcagcattcatggtggt
atagaatcacctattaaaacggaggtgggtacctctctcgatgtaaataatattcattct
tatggaggagagtattcttataataacagtttgaaaagtgtaaaaatggaaaaaggaaac
tattatggtattcaaactaaaaaaagcaaaaaaaataatgaaggtagtgatgaagaatat
caaccttatggtgatgaaatgtatgatgatgaaaattatggaaacgaatcattttcacaa
agaaggaaatataaaaattatggagaatatgaaaacatgggaaataattcagaatatgat
gaagatgaaacaaatgagcaatatgacaattcactatacccacaagataaagaaatccga
aataaatattcacagaattataatgacattgaaaatagtaatagtggtaaatatttaaac
acaagaatgggtaataaagaaaatgtaaatttatacgatccgaataaaaaaatagacgga
agacgaggaagaaaaaaaaaaaaaggcgtatatgcatataaacaaaataatttatattat
aaaagtcttcaaagtagagaaaataataatatggaagaagaaaataatgatttttttttt
tcttcatcaaatattaaaaaagaagatttgttaacatgtgcaccatgtggtagtttgata
gaagttttgaaaaaaaagaaatttatacttgatgatataaataatagtgctaatattgct
aataataatagtaataataaaacgataaatatgagtagggaagcattttcatggttttta
aaagatatacgaagtagaataatatctctagttattgaatatttgctgataatcgatgat
ggaaatgtaacaaatatagctaagcaaaattcagctaaatataaaaaaaaaaacaattca
gaaaatgtgatttctagtgatggaaatgaagctttagaaaatagttccatcacaaatact
cttataaatgattttaacaataatgataatatgaataataataataataataataataat
atgaacggaggggaatgggatactaacaatgaagatatgaataatgcagatggtgtaaat
ataaacataaaagatacacacgattatataacagatccaaataaaaattctcaaaaatcc
gagatatatgtaaaagaaacattattattaattttatcactaacccaatgtaatattggt
caaccaatatttttagaaaacttaacaaaagctcaaaaagaatttgtagattttggtata
catatagggttatttttaaaaacacatgatagttatatatttataacaccatatgcatta
ttattaacaataaataatttaaatgttgaaaattatatatctatattaaatcatctatct
gtagaaaaattttgtgaagaatctggttataataataatgatgatgaaaatataaaaaaa
aaagcaaaattaagtgaaatatattttcataaatatttattattacaaaatacggcccgt
gtgaaaaatgagccactaatagatgaggacgagaaaaaaaaattgaaaaaaattgaaaca
aaaaattttatttcgcaagacataactaatcacaatatacattcagaaaaaaggttaaat
gaaaatgataatttagaaatcgggttaatcattcaaagtaattttaaagtttatttgtat
acttcgtcaattttaaaaataaatattttaagccatttatgtgaattacaagcaagaaca
ccaaatatggttgttggtatattaacaagaagaagcgtactaaatgcatataactcagat
attaccgctgatcaaattattaaatttttagaatcttattcacatcctggaaaaacaaaa
ttaaaaagtataataccaattaatgttattactcagcttaaattatgggaagctgaaaga
catcgattaatattagaagattctattgtttttaaaaatttcgaaaaagaatatttacca
catttatatcaacaaattgttatttgggctaatagcaaaaattatttattacattatacc
ccatggccaaaaaacactaattccactgaatttgatacatggatgaaagcagaaaaatat
ttatgttgtatatatgagtctaaaaatgaaattattgataagataaaggaaattcgtggt
aagttgatgaaaaaacgtcaggcaatatga
DBGET
integrated database retrieval system
