Prionailurus bengalensis (leopard cat): 122485238
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Entry
122485238 CDS
T07574
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg03013
Nucleocytoplasmic transport
pbg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122485238 (UPF3A)
03015 mRNA surveillance pathway
122485238 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbg03019
]
122485238 (UPF3A)
Messenger RNA biogenesis [BR:
pbg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
122485238 (UPF3A)
mRNA cycle factors
P-body specific factors
122485238 (UPF3A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
122485238
NCBI-ProteinID:
XP_043439664
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All DBs
Position
A1:83225293..83249626
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AA seq
556 aa
AA seq
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MRSEKEGAGGPGAAVAARGPSGREKPSAVEVQFRRESPRREPEAPPASFFVCGDGICKHR
EEKKTVLSKVVIRRLPPSLTKEQLEEQLHPLPAHDYFEFFTADFSLYPHLYSRAYINFRN
PDDILLFRDRFDGYIFIDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKKF
LETYCVEEEKTNANPETLLGDMEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERR
RRELEKKRLREEEKRKKRDEERCKRKEADKQKRIAEREVRIKLLKKPEKGEEPTTEKPKE
RGEEMDTRDGEQESCPGCAVRKPMPLGSSLEEPREKSQNESNEEQRELDRRFREKDPETQ
RCHLDDSRKQRAHCEFDTFSRRNEEELRWGKGGPPDRGKKGSQDSGNAVEAAERPGKEQR
SEGGPAAKTERPGNKGRQNHRQEESLLHPWLITSVSPRSFSSFLNLRIGRPCSCTSQEFA
SEHEKVVGEPLWSALAGTRTRLKIQHRGVPRRAKRQGKEPIYKMKRQPMERKKISSNNIP
NKGLISKIWKEFITTQ
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcagagaaagagggggccggaggcccaggggctgccgttgctgcgcggggcccg
agcgggagggagaagccgtcggccgtggaagtccagttccgccgggagtcgccgcggcga
gaacccgaggcgccaccagcctcgttcttcgtttgcggggacggcatttgcaaacatcgc
gaggagaagaaaacggtcctgagcaaggtggtcatccggcggcttcctcccagcctcacc
aaggagcagctggaagagcagctacacccactgccggcacatgattactttgagttcttt
actgctgatttcagtctttatcctcatctctactcaagagcatacattaattttagaaat
cctgatgacatccttctttttagagatcgttttgatggatatatcttcattgacagtaaa
ggcctagaatatcctgcagtggtagagtttgccccattccagaagatagccaaaaagaag
ctaaagaaaaaagatgccaaaaccggaagcattgaagatgatccggaatacaagaagttt
ttggaaacttactgtgtggaggaagagaaaacgaatgccaatcctgaaactcttctggga
gacatggaggcaaagacaagagagcttattgctagaagaaccacacctcttttggaatat
attaaaaatagaaaattagagaagcagaggattcgagaagagaagcgagaagagcgaagg
aggagggagctggagaagaagcgcttacgggaagaagaaaagagaaaaaagagagacgag
gagaggtgtaagagaaaagaagcagacaaacagaagagaatagcagagagagaagtaagg
attaagcttcttaagaaaccagaaaagggagaggaaccaaccactgagaagccaaaagaa
agaggagaggaaatggatactagagatggagaacaggagtcctgtcctggctgtgctgtc
cggaagcccatgcccttggggagctcgctggaggagcccagggaaaagtcacagaatgag
agcaatgaagagcaaagggagttggaccgaagattcagagaaaaagaccctgaaacacaa
agatgccacttggatgacagtagaaagcagagagctcactgtgagtttgacacgttttcg
cggagaaatgaggaggagctgagatgggggaaaggaggcccccccgacagagggaagaag
gggagccaggacagtggcaacgctgtggaggcagcagagcggcccgggaaagagcagagg
agtgaaggtggcccagcagccaaaacggagcgcccaggaaacaagggcaggcaaaaccac
aggcaagaggagagccttcttcacccctggctaatcacatctgtgtcacccaggagtttc
tctagtttccttaatctcaggatcggccggccttgcagctgtaccagccaagagttcgca
tccgagcacgagaaggtggtaggggaacctctgtggagtgccctggcaggaacaaggacg
aggctgaagattcagcacaggggggttcccagaagagcgaagaggcagggaaaggaacct
atctataaaatgaagaggcagcctatggagaggaagaagatatcttcaaacaacatacct
aataaggggttaatatccaaaatatggaaagaattcataacaactcaatag
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