Prionailurus bengalensis (leopard cat): 122486878
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Entry
122486878 CDS
T07574
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg03022
Basal transcription factors
pbg03420
Nucleotide excision repair
pbg05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122486878
09124 Replication and repair
03420 Nucleotide excision repair
122486878
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
122486878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbg03021
]
122486878
03400 DNA repair and recombination proteins [BR:
pbg03400
]
122486878
Transcription machinery [BR:
pbg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122486878
DNA repair and recombination proteins [BR:
pbg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122486878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
122486878
NCBI-ProteinID:
XP_043442531
LinkDB
All DBs
Position
A1:136800448..136836757
Genome browser
AA seq
395 aa
AA seq
DB search
MDDEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL
SGNPRKHITSLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSSLTTCDPS
NIYDLIKTLKATKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPP
ASSGSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDSNTEPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEHNGERFCYGCQGELKDQHVYVC
AVCQNVFCVDCDVFVHDSLHCCPGCIHKIPTSSGI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaacctgaaagaactaagcgatgggaaggaggctatgaaaggacatgggag
attcttaaagaagatgaatcaggatcacttaaagctacaatagaagatattctcttcaaa
gcaaagagaaaaagagtgtttgagcaccatggacaggttcgacttggaatgatgcgtcat
ctttatgtggtagtagatggatcaagaacaatggaagaccaagatttaaagccaaataga
ttgacttgtactttaaagttgttggaatacttcgtagaagagtattttgatcaaaatcct
attagtcagattggaataattgtaacaaagagtaaaagagctgaaaaactgaccgaactc
tcaggaaacccaaggaaacacattacatctttgaagaaagctgtagatatgacctgccat
ggagaaccatctctctataactcattaagcatggctatgcaaactctaaaacacatgcct
ggacatacaagtagagaagtgctaatcatctttagcagcctcacaacgtgtgatccatct
aatatctatgatctaatcaagaccctaaaggcaactaaaattagagtgtctgttatcgga
ttgtctgcagaggttcgggtttgcactgtacttgctcgtgaaactggtggcacataccat
gttatcttagatgaaagccattacaaagaattgctgacacatcatgtcagtcctccacca
gctagctcaggttctgaatgctcacttattcgtatgggatttcctcagcataccattgct
tctctgtctgatcaagatgcaaaaccctctttcagcatggcgcacttggatagcaacact
gagccaggactcacattaggagggtatttctgcccacagtgtcgagcaaagtactgtgaa
cttccagttgaatgtaaaatctgtggtcttactttggtgtctgctccccatttggcacgg
tcttatcatcatttatttcctttggatgcttttcaagagattcctctagaagaacataat
ggagaaagattttgttatggatgtcagggggaattaaaagaccagcacgtctatgtttgt
gctgtgtgccaaaatgttttctgtgtggactgtgatgtttttgttcacgattctctccac
tgctgtcctggctgtattcataagattccaacttcttcagggatttga
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