Python bivittatus (Burmese python): 103051121
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Entry
103051121 CDS
T03091
Symbol
COL6A1
Name
(RefSeq) collagen alpha-1(VI) chain
KO
K06238
collagen type VI alpha
Organism
pbi
Python bivittatus (Burmese python)
Pathway
pbi04510
Focal adhesion
pbi04512
ECM-receptor interaction
pbi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pbi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103051121 (COL6A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103051121 (COL6A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103051121 (COL6A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pbi04147
]
103051121 (COL6A1)
00536 Glycosaminoglycan binding proteins [BR:
pbi00536
]
103051121 (COL6A1)
Exosome [BR:
pbi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103051121 (COL6A1)
Glycosaminoglycan binding proteins [BR:
pbi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103051121 (COL6A1)
Hyaluronan
Extracellular matrix or blood plasma proteins
103051121 (COL6A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
VWA_CoxE
DUF1194
Motif
Other DBs
NCBI-GeneID:
103051121
NCBI-ProteinID:
XP_007435254
UniProt:
A0A9F2R3C1
LinkDB
All DBs
Position
Unknown
AA seq
1011 aa
AA seq
DB search
MKLACIFLIFLFQDCFLLRRVLAQGTEISSRVIAFQDCPVDLFFVLDTSESVSLRVKPLG
KANVDKIKAFTNQFIDKLNDRYYRCDRNLVWNAGALHYSDEVVLIKKLTRMPSGRPDLKN
SVSSVESIGKGTYTDCAIKAGLEELLIGGSHHRENKYLIVVTDGHPLEGYKEPCGGLEDA
ANEAKHQGIKVFSVAVSPDHLESRLNVIATDHEYRRNFTATEPQSDIPRTIDTIIEMIKD
NVEDVCCSYECQPPRGPPGQIGDPGDEGERGRPGLPGEKGDAGDPGKQGDPGPIGYQGMK
GEKGGRGDKGSRGAKGGKGEKGKRGIDGIDGRKGEQGYHGLPGCKGSPGFDGLQGPPGQK
GDSGSYGPKGIKGDPGPKGRPGPQGKDGRPGEKGLPGELGAKGEKGEWGDEGSPGPDGSL
GEKGSPGSLGLRGVPGARGPKGEKGEPGPVGEQGREGLFGPPGDPGKEGAPGPKGFRGDE
GPPGPEGRKGSVGPPGITGNPGLMGDRGDDGPPGNGTDGYPGAPGDPGIRGDRGVNGTKG
YPGPKGDDGDIGEPGMQRNETGVNGKKGAKGYRGPEGAPGPPGPPGLPGPDECEILDIIM
KMCSCCECRCGPIDIIFVLDSSESIGLTNFGIAKDFIVKVIDRLRTEEHVTFSREESNLA
IVQYSHGGTEELVLMKDGDVKGFKEAVMNLHWIAGGTFTGEALEYTKQRLPPFFTHKRVV
IVITDGRTDTFHDRTPITVLCERDTQVVPVGSSDIFHDPPDSEKLSKISCGGLTFTQPEY
IALLDDTFIQNVTSYVCREKECPDYTCPITFANSADITLLVDSSTSVGAHNFNTTKKFVK
RLAERFLLADKSPGASVRVTVVQYSGPTQQKLEVDFQRNYTVIADIIDKMEFINDGTDVV
AALNYVTNQYQRSSRPAIKKRVLIFSDGNSQGVSGNAIERAIQNAQQAGIDIYVLAVGTQ
ANEPNLRLLVSQKAAQDEVAYRERHLFRVPDYQSLLKGVFYQTVSRKIAMD
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgaagttagcctgcattttccttattttcctgtttcaagactgttttctgttgaggagg
gttctcgctcagggaacagaaatatccagcagagtaatagccttccaagattgcccggtg
gatttgttttttgtcctggatacctctgagagcgtttccttaagggtaaagcctttgggt
aaagccaacgttgacaagatcaaagcattcactaatcaattcattgataaattaaatgac
agatactatcggtgtgaccggaacctagtgtggaatgcaggtgccttacattacagtgat
gaagtggtgctgatcaagaaacttacccgtatgcccagtgggcgaccagacttaaagaac
agtgtgtcctcagtagaatctattgggaaaggcacctataccgactgtgctatcaaggca
gggcttgaagaactactcataggaggatctcatcatagagaaaataagtaccttattgtg
gtgacagatggacatcctttagaaggttacaaagagccttgtgggggactggaagatgct
gccaatgaagcaaaacatcaggggatcaaagtgttctctgttgctgtatctccagaccat
ctggaatccagattaaatgtgattgctacagaccatgaatatcgtcgcaatttcacagca
actgaaccacaaagtgatattcctagaacaattgacaccatcattgaaatgattaaagat
aatgtggaagatgtgtgctgttcctatgaatgccagcctcctcgaggacccccaggacaa
ataggggacccaggagatgagggagaaagggggagacctggcttgccaggagaaaaagga
gatgctggagatcccggaaagcaaggtgacccaggacctattgggtaccaaggaatgaag
ggagaaaagggtggccgaggggacaagggctcaagaggtgcaaaaggaggcaagggagag
aagggcaagcgtggcatcgatggcattgatggcaggaagggtgaacaaggatatcatggg
ctaccaggatgcaaaggatctcctgggtttgatggcttacaaggacctcctggacaaaaa
ggggattctggttcttatggacccaaagggataaagggagaccctgggcccaaaggaaga
ccaggccctcaaggaaaagatggacgtcctggcgaaaagggtctgcctggagaattggga
gccaaaggagaaaaaggagaatggggagatgagggaagtcctggacctgatggtagcctt
ggagagaagggtagccctggatccctagggttgcgaggtgtccctggggctcgtggacca
aaaggagaaaagggtgagccaggtccagtgggagaacaaggccgtgaaggactttttgga
ccaccaggagacccaggtaaagaaggtgcacctggacctaagggatttcgaggagatgaa
ggacctcctggaccagagggccgtaaagggtcggttggaccacctggaataactggaaac
cctgggttgatgggtgataggggagatgatggcccaccaggaaatgggactgatggttat
cctggtgctccaggagatcctggaatcagaggtgaccgtggagttaatggcaccaaaggc
tatcctgggccaaaaggggatgacggtgacattggagaacctggtatgcaaagaaatgaa
actggggtcaatggcaagaaaggtgccaaagggtacaggggaccagaaggagctccagga
cctccaggacctccaggactccctgggccagatgaatgtgaaattttagatatcatcatg
aaaatgtgttcttgctgtgaatgcaggtgtggtccaattgatattatattcgtactggac
agttctgagagtattggactaacaaactttggcattgcaaaggactttattgttaaggtt
attgacagactgcgcacagaagaacatgtaacattctccagagaggaatccaatcttgct
attgtgcaatatagtcatggtggaaccgaggaactggtgctcatgaaagatggagacgtt
aaaggtttcaaggaggctgtgatgaaccttcactggattgctggtggcacctttactgga
gaggctcttgagtacaccaaacaacgtctgcccccatttttcactcacaaaagagttgtt
attgtcatcacagatggacggactgacacatttcacgatcgaacaccaatcactgttctt
tgtgaaagagatactcaggttgtccctgtgggttccagtgacattttccatgaccctcca
gattctgaaaaattaagtaagatatcctgtgggggcctcacatttacccaaccagagtat
attgccctgctggatgacaccttcattcagaatgttacctcttatgtctgtcgagaaaag
gaatgtcctgactatacctgcccaatcacttttgctaattcagctgatatcacactcctt
gtggatagctctactagtgttggagcccataacttcaataccaccaagaagtttgtgaaa
cgtcttgcagaacgattcctgttagctgacaaaagtccaggtgcttctgtgcgcgtcact
gttgtccagtacagtggccccacacagcaaaaactggaggtggattttcaacggaactac
acagtgatagctgatataattgacaaaatggaatttataaatgatggcacagatgtggtt
gcagccttgaactatgtcaccaaccaatatcagaggtcctctcgtcccgctattaagaag
agggtgctgatcttctcggatggcaattctcaaggtgtctctggaaatgccattgagaga
gcaatccagaatgctcaacaggcaggcattgatatttatgtacttgctgttggcacacaa
gccaacgagcccaatctacgtttgcttgtctcccaaaaagcagctcaggatgaagtagcc
tacagagagcgccaccttttcagagtacctgattatcaatctttgttgaagggtgtattc
tatcaaactgtctccagaaaaatagctatggactga
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