Desulfobaculum bizertense: LWC08_13620
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Entry
LWC08_13620 CDS
T07819
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
pbiz
Desulfobaculum bizertense
Brite
KEGG Orthology (KO) [BR:
pbiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbiz03019
]
LWC08_13620
Messenger RNA biogenesis [BR:
pbiz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LWC08_13620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Cas3_HD
RMI2
Motif
Other DBs
NCBI-ProteinID:
UIJ37715
LinkDB
All DBs
Position
complement(2974478..2975509)
Genome browser
AA seq
343 aa
AA seq
DB search
MIRKQTFVRDLAPGRNIDDVFVVVEARQAQAKNGPFWALTLGDNSGEVPARIFYPMSQSY
PQLSSGTALRVMGQVQTYRDEPQIIVDSVQELDPAAEGLRLGDFVPSSKREPEDMLADIE
RLCKKHLGYRPWRTLCRKVLTDPQIKPKIIAAPGAVSMHHAYAGGLIEHTLGVCRLCMAY
ADLYPHLDRQVLLAGAIFHDLGKAWEYSAGLARERTDIGKLLGHIQIGLQKLEPFLERAT
DLDDDLKTHLRHLILSHHGALEFGSPTLPQTAEALALHFADNMDAKMNTIEVATEDIAAG
ETGWSQYLRALSRSVYQPRHTPAPRPDNEKEEANQLCLLPLKG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtaagcagactttcgttcgggatctcgccccgggccggaacattgacgatgtt
tttgtcgttgttgaagctcgacaggctcaggcgaaaaatggccctttttgggctctgacg
cttggcgacaattccggcgaggtaccagcaagaatattttaccccatgagtcagagttat
cctcagctcagttcggggactgcccttcgggtcatggggcaggttcagacctaccgcgat
gagccacagatcattgtggattctgttcaggaattggaccctgctgccgaaggcctgcgc
cttggagactttgttccctcaagcaagcgcgagccagaagacatgcttgccgacattgaa
cggctttgcaaaaagcaccttggctatcgcccgtggcgcaccctgtgccgcaaggtgctc
actgacccgcagatcaaacccaaaatcattgctgcccccggcgccgtgagcatgcatcac
gcctacgctggcgggctgattgaacatacacttggagtctgtcgcctgtgcatggcctat
gcagacctctacccgcatctagaccgtcaggtgcttttggccggagccattttccatgac
cttggcaaggcatgggaatatagcgcaggccttgcccgcgagcgaaccgacattggcaag
cttcttgggcacatccagattggcctgcaaaagctcgaaccatttctggaacgggccaca
gaccttgatgacgatctcaaaacgcatcttcggcatctcatcttgagccaccacggtgct
ctggaatttgggtccccgaccctgccccagactgccgaagctctggccctgcacttcgca
gacaacatggatgccaaaatgaacaccatcgaagtggcaacagaggacatcgccgctgga
gaaacaggctggtcgcaatacctgcgcgccctgtcccgttctgtctaccagccgcggcac
actccggcccctcgacccgacaacgaaaaagaggaagctaaccagctatgtttgttacct
ttgaagggatag
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