KEGG   Paenibacillus beijingensis: VN24_17930
Entry
VN24_17930        CDS       T03802                                 
Name
(GenBank) hypothetical protein
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pbj  Paenibacillus beijingensis
Pathway
pbj03410  Base excision repair
pbj03430  Mismatch repair
pbj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pbj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    VN24_17930
   03430 Mismatch repair
    VN24_17930
   03440 Homologous recombination
    VN24_17930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbj03400]
    VN24_17930
DNA repair and recombination proteins [BR:pbj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     VN24_17930
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     VN24_17930
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      VN24_17930
SSDB
Motif
Pfam: RecJ_OB DHH ssDNA-exonuc_C DHHA1
Other DBs
NCBI-ProteinID: AJY76095
UniProt: A0A0D5NLQ9
LinkDB
Position
3972523..3974934
AA seq 803 aa
MIKSKTRWLVKGLDAAGEQQAAHLGRELKLPPLVARLLVQRGYEDPAKAQWFLSAGAEDM
HDPMLLLGMEQAAARIRQAAQSGEKVRIYGDYDADGVSSTALLLHVFRRLGIDADYYIPH
RTREGYGLNNDAILRSAEAGITLLVTVDTGVSAAREVEYAQQLGMDVIVTDHHEPPAVLP
QPLALVNPKQPGCPYPFKGLAGAGVAFKLAHALLGRPPLELADIAALGTIADLMPLTGEN
RILVRCGLETMRSGSRTGLRALAEAADVSLGSVSASDVAFFMAPRINAAGRLKHASEAVV
LLTTEDAEQAGNSAAVLDLLNRERQHIVDEMTKEAEELWQVRKRQCIDEGLPEPGVIVLA
AEGWNPGVIGIVASKLLERHYKPAVILGIDAQTGMCKGSARSIDGFDMYAALTECAGLMD
HFGGHQAAAGMSLHRDRLPEFEQTLCACAARVLKAEDLIPKTLIDLECALSEATLETIGQ
LSQLEPFGSANPAPRLLINGARLAERRVIGKERNHLKLLLGGVQGADLDAIGFGLGWVAG
RLEAAESADVIGELSVNEWNGRRKPQLLLRDLRVSELLVYDRRNETEPLASLRRIADDAA
AGGSQLYVVGDEGGLPETASALQLGDSKKHADETGSIAGFYTYEALPADLSDCRELALIG
RPPAIERLAAFLSRCPNLEAVHAMYRTAGPAGFPQREHFGAVYQLLRRAGEIPAAIAPDR
LASQTGWPKEAVEMMLGVFKELELVTRLGGAIAPAASPRKRELDESALYRDWRQRTEEAA
VLQAPLEELARWMRKQLHLTERN
NT seq 2412 nt   +upstreamnt  +downstreamnt
gtgattaaatccaaaacccgctggcttgtcaaagggttggatgcagccggcgagcagcag
gcagcccatcttggccgggagctgaaactgccgcctcttgtcgcccgcctgctcgttcaa
agggggtatgaagacccggcgaaagcgcagtggtttctgagtgcgggagcggaagacatg
catgatccgatgctcttgctcggaatggaacaggcggcagcccgtattcgtcaagcggct
caaagcggggaaaaggtccgcatctacggcgattatgatgccgacggcgtatcttcgaca
gcgcttctgctgcacgtgttccgccggctcggcatcgatgccgattattacattccgcat
cgcacaagggaagggtacggactcaataacgacgcgatactccgctccgcggaagcgggg
attacactgctcgttaccgtcgataccggagtcagcgccgcccgggaggtggaatatgcg
cagcagctcggcatggacgtcatcgtgacggaccaccacgagccgcctgccgtgctgccg
cagccgctggcgcttgtaaacccgaaacagcctggctgcccgtatccgttcaaagggctg
gcaggcgcaggcgtcgccttcaagctggcgcacgcgcttctggggcgcccgccgctggaa
ctggcggacatcgcggcgctcggcacaatcgcggatttgatgccgctgaccggcgagaac
cgtattctcgtccgctgcggactggagacgatgcgcagcggctccagaaccgggctgcgt
gcgctggcagaagccgccgatgtatcgctcggctccgtttccgcttcggacgtggccttc
tttatggcgccgcgcattaatgcggcggggcggctgaagcacgcctcggaagcggtcgtt
ttgttaacgaccgaggacgccgaacaggccgggaattcggcagccgtgctcgacctgctg
aaccgggaacgtcagcatatcgtcgatgagatgacaaaggaagcggaagagctgtggcaa
gtccgcaaacggcagtgtatcgatgaagggctcccggaaccgggcgtcatcgtgttggct
gcggaaggctggaacccgggcgtcatcggcatcgtcgcctccaagctgctggagcgccat
tataaaccggcggtaatcttgggcattgatgcccagaccgggatgtgcaaaggctccgcc
cgctcgattgacggattcgacatgtatgccgccttaacggaatgcgccggcttgatggac
cactttggcggccaccaggccgctgcagggatgagccttcaccgcgaccgtctgcccgag
ttcgaacaaacgttgtgcgcttgtgcagctcgggtgcttaaggccgaagacctaatacca
aagacgttgatcgatctcgaatgcgcactttcggaagcgacgctggagacgatcgggcag
ctgtcgcagctggagccgttcggaagcgccaatccggctccaagactgctgatcaacggc
gccagattggcggaacgaagggtcatcgggaaggaacggaaccatttgaagctgctgctt
ggcggcgttcaaggagcggatctggatgcgatcggctttgggcttggctgggtagccggg
cggctggaagcggctgagagcgccgatgtgatcggcgagctgtccgtgaacgaatggaac
ggacgccgcaagccgcagctcctgctccgggatctgcgcgtatcggagctgcttgtttat
gacaggcgcaacgaaacggaaccgcttgcgagcttgcgccgcatcgcggatgatgctgcc
gccggcggatcgcagctgtacgttgtaggagacgagggcgggttgccggaaacggcatcc
gcgcttcagttgggcgattcaaagaagcatgcggatgagaccggcagcatagcgggcttt
tatacatatgaggcgctgcctgccgacttgtccgattgccgcgagctggcgcttatcggc
cgcccgccagcgatcgaacggctggccgcatttttaagccggtgcccgaatttggaagcg
gtgcacgcgatgtaccgcaccgccggtccggcaggttttccgcagcgtgaacatttcggc
gccgtttatcagctgctgaggcgtgccggggaaattccggcggcaatcgcaccggatcgg
cttgcttctcaaacaggctggccaaaagaggcggtagagatgatgctgggcgtctttaag
gaattggaattggtaacaaggctcggaggggcaatcgccccggcggcatcgccccggaag
cgcgagcttgacgaatccgctctgtaccgcgactggcggcaaaggacggaggaagcggcc
gtgctgcaggcgccgctggaagagctcgcccgttggatgcgtaaacaacttcatttaacc
gaaaggaactga

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