Paenibacillus beijingensis: VN24_17930
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Entry
VN24_17930 CDS
T03802
Name
(GenBank) hypothetical protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pbj
Paenibacillus beijingensis
Pathway
pbj03410
Base excision repair
pbj03430
Mismatch repair
pbj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VN24_17930
03430 Mismatch repair
VN24_17930
03440 Homologous recombination
VN24_17930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbj03400
]
VN24_17930
DNA repair and recombination proteins [BR:
pbj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
VN24_17930
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VN24_17930
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
VN24_17930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
ssDNA-exonuc_C
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AJY76095
UniProt:
A0A0D5NLQ9
LinkDB
All DBs
Position
3972523..3974934
Genome browser
AA seq
803 aa
AA seq
DB search
MIKSKTRWLVKGLDAAGEQQAAHLGRELKLPPLVARLLVQRGYEDPAKAQWFLSAGAEDM
HDPMLLLGMEQAAARIRQAAQSGEKVRIYGDYDADGVSSTALLLHVFRRLGIDADYYIPH
RTREGYGLNNDAILRSAEAGITLLVTVDTGVSAAREVEYAQQLGMDVIVTDHHEPPAVLP
QPLALVNPKQPGCPYPFKGLAGAGVAFKLAHALLGRPPLELADIAALGTIADLMPLTGEN
RILVRCGLETMRSGSRTGLRALAEAADVSLGSVSASDVAFFMAPRINAAGRLKHASEAVV
LLTTEDAEQAGNSAAVLDLLNRERQHIVDEMTKEAEELWQVRKRQCIDEGLPEPGVIVLA
AEGWNPGVIGIVASKLLERHYKPAVILGIDAQTGMCKGSARSIDGFDMYAALTECAGLMD
HFGGHQAAAGMSLHRDRLPEFEQTLCACAARVLKAEDLIPKTLIDLECALSEATLETIGQ
LSQLEPFGSANPAPRLLINGARLAERRVIGKERNHLKLLLGGVQGADLDAIGFGLGWVAG
RLEAAESADVIGELSVNEWNGRRKPQLLLRDLRVSELLVYDRRNETEPLASLRRIADDAA
AGGSQLYVVGDEGGLPETASALQLGDSKKHADETGSIAGFYTYEALPADLSDCRELALIG
RPPAIERLAAFLSRCPNLEAVHAMYRTAGPAGFPQREHFGAVYQLLRRAGEIPAAIAPDR
LASQTGWPKEAVEMMLGVFKELELVTRLGGAIAPAASPRKRELDESALYRDWRQRTEEAA
VLQAPLEELARWMRKQLHLTERN
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
gtgattaaatccaaaacccgctggcttgtcaaagggttggatgcagccggcgagcagcag
gcagcccatcttggccgggagctgaaactgccgcctcttgtcgcccgcctgctcgttcaa
agggggtatgaagacccggcgaaagcgcagtggtttctgagtgcgggagcggaagacatg
catgatccgatgctcttgctcggaatggaacaggcggcagcccgtattcgtcaagcggct
caaagcggggaaaaggtccgcatctacggcgattatgatgccgacggcgtatcttcgaca
gcgcttctgctgcacgtgttccgccggctcggcatcgatgccgattattacattccgcat
cgcacaagggaagggtacggactcaataacgacgcgatactccgctccgcggaagcgggg
attacactgctcgttaccgtcgataccggagtcagcgccgcccgggaggtggaatatgcg
cagcagctcggcatggacgtcatcgtgacggaccaccacgagccgcctgccgtgctgccg
cagccgctggcgcttgtaaacccgaaacagcctggctgcccgtatccgttcaaagggctg
gcaggcgcaggcgtcgccttcaagctggcgcacgcgcttctggggcgcccgccgctggaa
ctggcggacatcgcggcgctcggcacaatcgcggatttgatgccgctgaccggcgagaac
cgtattctcgtccgctgcggactggagacgatgcgcagcggctccagaaccgggctgcgt
gcgctggcagaagccgccgatgtatcgctcggctccgtttccgcttcggacgtggccttc
tttatggcgccgcgcattaatgcggcggggcggctgaagcacgcctcggaagcggtcgtt
ttgttaacgaccgaggacgccgaacaggccgggaattcggcagccgtgctcgacctgctg
aaccgggaacgtcagcatatcgtcgatgagatgacaaaggaagcggaagagctgtggcaa
gtccgcaaacggcagtgtatcgatgaagggctcccggaaccgggcgtcatcgtgttggct
gcggaaggctggaacccgggcgtcatcggcatcgtcgcctccaagctgctggagcgccat
tataaaccggcggtaatcttgggcattgatgcccagaccgggatgtgcaaaggctccgcc
cgctcgattgacggattcgacatgtatgccgccttaacggaatgcgccggcttgatggac
cactttggcggccaccaggccgctgcagggatgagccttcaccgcgaccgtctgcccgag
ttcgaacaaacgttgtgcgcttgtgcagctcgggtgcttaaggccgaagacctaatacca
aagacgttgatcgatctcgaatgcgcactttcggaagcgacgctggagacgatcgggcag
ctgtcgcagctggagccgttcggaagcgccaatccggctccaagactgctgatcaacggc
gccagattggcggaacgaagggtcatcgggaaggaacggaaccatttgaagctgctgctt
ggcggcgttcaaggagcggatctggatgcgatcggctttgggcttggctgggtagccggg
cggctggaagcggctgagagcgccgatgtgatcggcgagctgtccgtgaacgaatggaac
ggacgccgcaagccgcagctcctgctccgggatctgcgcgtatcggagctgcttgtttat
gacaggcgcaacgaaacggaaccgcttgcgagcttgcgccgcatcgcggatgatgctgcc
gccggcggatcgcagctgtacgttgtaggagacgagggcgggttgccggaaacggcatcc
gcgcttcagttgggcgattcaaagaagcatgcggatgagaccggcagcatagcgggcttt
tatacatatgaggcgctgcctgccgacttgtccgattgccgcgagctggcgcttatcggc
cgcccgccagcgatcgaacggctggccgcatttttaagccggtgcccgaatttggaagcg
gtgcacgcgatgtaccgcaccgccggtccggcaggttttccgcagcgtgaacatttcggc
gccgtttatcagctgctgaggcgtgccggggaaattccggcggcaatcgcaccggatcgg
cttgcttctcaaacaggctggccaaaagaggcggtagagatgatgctgggcgtctttaag
gaattggaattggtaacaaggctcggaggggcaatcgccccggcggcatcgccccggaag
cgcgagcttgacgaatccgctctgtaccgcgactggcggcaaaggacggaggaagcggcc
gtgctgcaggcgccgctggaagagctcgcccgttggatgcgtaaacaacttcatttaacc
gaaaggaactga
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