Paenibacillus beijingensis: VN24_20125
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Entry
VN24_20125 CDS
T03802
Name
(GenBank) primosomal protein DnaI
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pbj
Paenibacillus beijingensis
Pathway
pbj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VN24_20125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbj03400
]
VN24_20125
Enzymes [BR:
pbj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VN24_20125
DNA repair and recombination proteins [BR:
pbj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VN24_20125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
PriA_CRR
Helicase_C
PIF1
zinc-ribbons_6
DAP3
AAA_19
ADDB_N
AAA_16
TrwB_AAD_bind
SLFN-g3_helicase
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
AJY76456
UniProt:
A0A0D5NMF5
LinkDB
All DBs
Position
4457304..4460171
Genome browser
AA seq
955 aa
AA seq
DB search
MIASVIVDVPSRQTDRPFDYKVPAEMRAWIETGSRVGVPFGGRVVQGFVVAVSEQTEMDP
KRLKAIAELLDPTPPLRADLIELAEWISRKYVCTWTAALQAMIPGALKGKAERSVRFGAA
ALKALSPESAPQMRPTSGSLAAAAHGTDDASGSDVRYGHEAAAAEAGAGAESRNRGTADT
YGAGVRHEHEAAAAKAVAGAETAAGTIARASDAAEPEGTDAAEPGLAAGSASGAGASGAS
EAGVSADMRGAFAALPSELVRELLRHGSIRLAALQERYPHAGDAVKSALRQGLLEEQTAI
RDRLSVRKVLAVYPPPDRPAAEEALAALPKRAGKQREVLAFALDLEEPLPLQALLAETGA
SAGSVRALADKGMLDVREIKQERDPYAGREFVRTEPLPLTPGQQEVFERVAAAVDAESPQ
TFLLHGVTGSGKTEVYMQSIQHCLEQGKQAIVLVPEISLTPQMVERFKGRFGDMVAVLHS
RLSNGERYDEWRKIRERRVEVAIGARSAVFAPFERIGLIVIDEEHESSYKQEETPKYHAR
DVAVRRAKQHGAVVVLGSATPSLETYAAAVRSAGPDGRPASLLPLPERVGARPMPPVAVV
DMRQELKGGNRSMFSRALHEGLAARLERGEQSVLLLNRRGYSTFVMCRSCGYTATCPHCD
ITLTYHQRTRALRCHYCGHAEMAPRLCPSCGSEHIRYFGAGTQRVEEELAKLFPGIRVIR
MDVDTTTEKGSHEKWLKLFGERKADVLLGTQMVAKGLDFPYVTLVGVIAADTSLGLPDFR
AGERTFQLLTQVAGRAGRHHLPGEVVVQTYTPEHYAIQTAQQHDYETFVQDELKHRRMMG
YPPFCRLILVTMSHEQLPLLSSVSERFAARLRELAALSGVLGSVQGPGQRAMELLGPVAS
PISRMKDRYRFQCMIKYRGNIDASGLIREALASFTEGAPKGQVQFSVDVDPHMIL
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcatccgtcattgtggacgtgccgagccggcaaacggaccgtccgttcgattat
aaggtgccggcggagatgcgcgcgtggattgagacgggcagccgggtcggcgtgccgttc
ggcggccgggtcgtccaaggctttgttgtcgccgtctcggagcaaacggagatggacccg
aagcggctgaaggcgattgcggaactgctcgatccgacacccccgctgcgcgcggacttg
atcgagctggccgaatggatcagccgcaaatatgtgtgcacgtggaccgccgcgctgcag
gcgatgattcccggagcgctgaaaggcaaagcggagcgcagcgtgaggttcggcgcagcg
gcgctgaaggccctatcgccggagagcgcgccgcagatgcggccgacttccggcagtttg
gctgcggccgctcacggaacggacgatgcatccggatcggatgtccggtacgggcatgaa
gccgccgcagcggaagcgggagccggggccgaatcgcgaaatcggggaacggccgataca
tacggcgcgggcgtccggcatgagcatgaagctgccgcagcgaaagcggtggccggagcc
gaaacggcggccgggacgatcgcgcgggcgagtgacgcagcggaaccggaagggaccgat
gcggcggagccgggattggctgcgggaagcgcatccggtgccggcgcgtccggggcatcc
gaagccggggtcagcgcggacatgcggggcgccttcgccgcgctgccgtcagagctggtg
cgcgagctgctcaggcacggttccatccggctggcggcgctccaggagcgctacccgcac
gcgggtgatgcagtgaagagcgcgctgcgccaagggctcctggaggagcagaccgcgatc
cgcgaccggctgtcggtgcgcaaagtgttggcggtgtatccgccgccggaccgtccggcg
gcggaagaggcgctggccgcgctgccgaagcgggcgggcaagcagcgcgaggtgctcgcc
tttgcccttgatcttgaagagccgctgccgctgcaggcgctgctggcggaaacgggcgcc
tccgcaggcagcgtgcgggcgctggcggacaaaggaatgctggacgtgagggagatcaag
caggagcgcgatccgtatgccggacgggaatttgtccgcaccgagccgctgccgcttacg
ccggggcagcaggaagtattcgagcgcgttgcggccgccgtcgacgcggaatcgccgcag
acgtttttgctgcatggcgtcaccggaagcggcaagaccgaagtgtatatgcagtcgatc
cagcattgtctggagcagggcaagcaggcgatcgtgctggtgccggaaatttcgcttacg
ccgcagatggtggagcggttcaaagggcggttcggcgatatggtggccgtgctgcacagc
cgcctctcgaacggggagcgctacgacgagtggcgcaaaatccgcgagcgccgcgtggaa
gtggccatcggcgcacgttcggcggtattcgcgccgttcgaacggatcggcctgatcgtg
atcgacgaagagcacgaatcgtcctataagcaggaggaaacaccgaaataccatgcgcgc
gacgtggccgtgcggcgggcgaagcagcacggcgccgtcgttgtgctcggctcggcgacg
ccttcgctcgagacgtacgcggcggccgtccgctcggcaggtccggacggccgcccggct
tcgctgctgccgctgccggagcgcgtcggcgcgcggccgatgccgccggtcgctgtcgtg
gacatgcggcaggagcttaaaggcggcaaccgctcgatgttcagccgcgcgctgcacgaa
gggctcgcggctcgtcttgagcgcggcgagcagtcggtgctgctgctcaaccgaaggggc
tattcgaccttcgtcatgtgccgttcctgcggctatacggcaacgtgcccgcactgcgac
attacgctgacgtaccaccagcggacgcgggcgcttcgctgccactactgcggtcacgcg
gagatggccccgcgcctgtgcccctcctgcggcagcgagcatatccgttatttcggcgcg
ggcacgcagcgggtggaggaagagctggcgaagctttttcccggcatccgtgtcatccgc
atggacgtggacacgacgacggagaagggctcgcacgagaaatggctgaagctgttcggg
gagcgcaaagccgacgtgctgctcggaacgcagatggtagccaaagggctcgatttcccg
tatgtgacgctggtcggcgtcatcgcggcggatacgtcgctcggtctgccggatttccgc
gcgggcgagcgcacgttccagctgctgacgcaggtggccggccgcgccggcaggcaccac
ctgccgggcgaggtcgtcgttcagacgtatacgccggagcattatgcgattcagacggcg
cagcagcacgactatgagacgttcgtgcaggatgaattgaagcatcggcggatgatgggc
tacccgccgttttgccggctcattctcgtcacgatgtcgcacgagcagctgccgctcctt
tcttccgtcagcgagcggtttgcggctaggctgcgcgagctcgccgccctcagcggtgtg
cttggctccgttcagggtccgggccagcgcgcgatggagctgctcggtcccgtcgcttcg
ccgatctcgcggatgaaggatcgctaccgttttcaatgtatgataaaatatcggggaaat
atcgatgcgtcgggcctgatccgcgaggcgctcgcttcgtttacggaaggcgcccccaaa
gggcaggtacagttcagcgtggacgtcgacccgcatatgattttgtaa
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