Paracoccidioides brasiliensis: PADG_05924
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Entry
PADG_05924 CDS
T03549
Name
(RefSeq) ATP-dependent RNA helicase DHH1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
pbn
Paracoccidioides brasiliensis
Pathway
pbn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PADG_05924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbn03019
]
PADG_05924
03036 Chromosome and associated proteins [BR:
pbn03036
]
PADG_05924
Enzymes [BR:
pbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PADG_05924
Messenger RNA biogenesis [BR:
pbn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
PADG_05924
mRNA degradation factors
5'-3' decay
Decapping complex
PADG_05924
Chromosome and associated proteins [BR:
pbn03036
]
Eukaryotic type
Gene silencing
piRNA pathway
PADG_05924
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
22584766
NCBI-ProteinID:
XP_010761262
UniProt:
C1GF88
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MADALASQLSSAKLGENNHSEKWKEHLKAPPKDTRTQTEDVTATKGLEFEDFYIKRELMM
GIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERTNPKNSKTQALI
LVPTRELALQTSQVCKTLGKHLGINVMVTTGGTGLQDDIIRLNEAVHIIVGTPGRILDLA
SKGVADLSECSTFVMDEADKLLSPEFTPVIEQLLSFHPKDRQIMLFSATFPLIVKSFKDK
HMRNPYEINLMDELTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELL
AKKITELGYSCFYSHAKMLQHNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFD
FPKNAETYLHRIGRSGRFGHLGLAINLINWEDRYNLYKIEQELGTEIQPIPQSIDKKLYV
YDTPDTIPRPITSTPTQPPKQQQQQQQQQASAPAQYPNNPEGHSRRQGHSQYPSHRGRGS
YRGGRGQGHRGGHAENHRQNGTGPRPNAAASAPVS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgcgcttgcttcgcagctgagtagcgcgaagctaggagaaaataaccactca
gagaaatggaaagaacatttaaaagcacccccaaaagacacgcgaactcaaactgaggat
gtcacggcaaccaaagggctggagttcgaggacttctacatcaaacgggaattgatgatg
gggatatttgaggctggtttcgaaaaaccctctcccatccaagaggaaactataccagtt
gccctcactggacgagatatcctcgcacgcgccaaaaatgggacaggaaagactgcggcg
tttgtgataccgacgctagaacgaaccaaccccaaaaactccaaaacgcaagcccttatt
ctcgtccccactagagaactcgccctccaaacctcccaagtctgcaaaactctcggtaag
caccttggtatcaacgttatggtaacaacaggaggaactggcctccaggatgatattata
cggctgaatgaagccgtccatatcattgttggcacacccggcagaattctggacctcgcc
agcaaaggagttgcagacttgtcagagtgttcgactttcgtgatggacgaggccgacaag
ctcctatcgcctgaattcactccagtcattgagcagctcctctcattccaccccaaagat
cgccaaattatgcttttcagtgccaccttcccattgattgtcaagtcgttcaaggacaaa
catatgaggaatccttatgagatcaacctcatggatgaactcacccttcggggtattacc
caatattatgcattcgtcgaggagaagcaaaaagtccactgcttgaatactctcttctcc
aaactccaaatcaaccaatccatcattttttgcaactctaccaaccgtgtcgaactactt
gcgaagaaaatcaccgaactcggctattcatgcttctattctcatgctaaaatgttgcaa
cataaccgaaaccgtgtgttccacgacttccgaaatggtgtttgccgaaacctggtctgc
tcggacctgttgacgcgtgggatcgatattcaagctgtgaatgttgtcatcaactttgac
ttccctaagaatgctgaaacgtaccttcatcgtatcggtcgttcgggtcgatttggacat
ctaggcctggctatcaatcttatcaattgggaagaccggtataatctctataagattgag
caggagctgggtacggaaattcagcctatccctcagtccatcgacaagaaactatatgtt
tatgatacacccgacacaattcccaggccaattacaagtacaccaacccaaccgccaaag
cagcagcagcagcaacagcaacagcaagcctctgcacctgcacaatatcccaacaaccca
gaaggtcacagtcgcaggcaaggtcattcccaatacccctcccatagaggtcgtggttcc
tatcgtggaggccgtggccaagggcatagaggtggccatgcagaaaatcatcgtcaaaat
ggaactggaccgcggccaaatgctgccgcgtccgcacctgtgtcataa
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