Paracoccidioides brasiliensis: PADG_06545
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Entry
PADG_06545 CDS
T03549
Name
(RefSeq) TFIIH/NER complex subunit SSL1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pbn
Paracoccidioides brasiliensis
Pathway
pbn03022
Basal transcription factors
pbn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PADG_06545
09124 Replication and repair
03420 Nucleotide excision repair
PADG_06545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbn03021
]
PADG_06545
03400 DNA repair and recombination proteins [BR:
pbn03400
]
PADG_06545
Transcription machinery [BR:
pbn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PADG_06545
DNA repair and recombination proteins [BR:
pbn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PADG_06545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Motif
Other DBs
NCBI-GeneID:
22585246
NCBI-ProteinID:
XP_010761918
UniProt:
C1GGV8
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MPTSDPEYVAQPSDNDLDELIASASDDDDELDTRPSASGRAARSKDARRRKKGRGGAEWE
VSRTWETLVEGADGTIRATVEGLLEAGKRRRVLRDTTPLQRGIIRHLILILDLSSAMSEK
DLRPTRYLLTLRYAQDFVREFFDQNPISQLGVVGMRDGLAVRISDMSGNPTEHILAIQGL
RAKDPKGMPSLQNALEMARGALFHTPSHGTREVLIIYGALLSSDPGDIHKTITSLITDKI
HVYVLGLAAQVSICQELVTRTNNGDDSGYNVAMNEQHFRELVLNVTTPPATTLASHTAAA
AANGTGTNPSTDGTLLPMGFPNRHLTPHPTLCACHSTPSRSGYLCPRCCTKVCTLPASCP
SCNLTLILSTHLARSYHHLFPLMNWVEVSWRKAARAEAEGRVGCFACGVGFAGVPGEFVG
AEGDEEREEEEDGKGEGKGASRGISVSGRYECLVCRCHFCIDCDVFAHEVVHNCPGCQSG
VVQVREQEGLDLSGDANGGGSGNGNGNGNGAVDVMDTE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcccacctcagaccctgaatacgtcgcccaaccctccgacaacgatctggacgagctc
atcgcctccgcctccgacgacgatgacgaactagatacccgaccctccgcctccggccgc
gccgcgcgctcgaaagatgccaggcgccgcaagaagggccgcggcggtgcggagtgggag
gtatcccgcacctgggaaacgctggttgagggtgcagatggcacgatccgcgcgacagtc
gagggcctgttggaggcgggcaagaggagaagagttctccgcgacaccaccccgctgcaa
cgcggcataatccgccacctaatcctaatcctcgacctctcctccgccatgtctgaaaag
gacctgcgcccaacccgctacctcctcaccctccgctacgcccaggactttgtccgcgaa
ttcttcgaccaaaaccccatctcccagctaggagtggtgggcatgcgcgacggcctcgca
gtccgcataagcgatatgagcggcaacccgacggagcatatactggctatccaggggctg
cgcgcgaaggatccgaaggggatgccgtcgttgcagaatgcgctggagatggctaggggg
gcgcttttccacacaccaagccacggcacccgcgaagtccttataatctacggcgccctc
ctaagctccgacccgggagacattcacaaaacaatcacctccctcatcaccgataagatc
cacgtctacgtccttggcctcgccgcgcaggtctccatctgccaagaactcgtcacaaga
acaaacaacggcgatgactcaggctacaacgtcgccatgaacgagcagcatttccgcgag
ttagttttgaacgtcaccaccccaccggccaccacactcgcctcccacaccgccgccgcc
gccgccaacggcacaggcacaaaccccagcacagacggcaccctcctccccatgggcttc
ccaaaccgccacctaaccccgcacccaaccctgtgcgcctgccactccaccccctcacgc
tccggctacctctgcccccgctgctgcacgaaagtctgcactctcccggcctcctgcccc
tcttgcaacctgaccttaatcctctcgacgcatctggcccgctcctaccatcacctgttc
ccgcttatgaattgggtggaggtgtcgtggcggaaggcagcgagggcggaggcggagggg
agggtggggtgctttgcgtgtggggtggggtttgcgggggtgccaggggagtttgtgggg
gctgagggggatgaggaaagggaagaggaagaggacgggaagggggaagggaagggtgct
agcagggggattagtgttagtgggcgttatgagtgtttggtttgtcggtgtcatttttgc
attgattgtgatgtatttgcccatgaggttgtgcataattgtcctgggtgtcagagtggg
gttgtgcaggtgagggagcaggaggggttggatttgagtggggatgcgaatgggggtggg
agtgggaatgggaatgggaatgggaatggggcggttgatgtgatggatacggagtag
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integrated database retrieval system
