Acidipropionibacterium acidipropionici ATCC 4875: PACID_00050
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Entry
PACID_00050 CDS
T02345
Symbol
dnaN
Name
(GenBank) DNA polymerase III, beta chain
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
pbo
Acidipropionibacterium acidipropionici ATCC 4875
Pathway
pbo03030
DNA replication
pbo03430
Mismatch repair
pbo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PACID_00050 (dnaN)
03430 Mismatch repair
PACID_00050 (dnaN)
03440 Homologous recombination
PACID_00050 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbo03032
]
PACID_00050 (dnaN)
03400 DNA repair and recombination proteins [BR:
pbo03400
]
PACID_00050 (dnaN)
Enzymes [BR:
pbo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PACID_00050 (dnaN)
DNA replication proteins [BR:
pbo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PACID_00050 (dnaN)
DNA repair and recombination proteins [BR:
pbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PACID_00050 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AFV87858
UniProt:
K7RSN6
LinkDB
All DBs
Position
6105..7265
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AA seq
386 aa
AA seq
DB search
MKIRLERDVMADAVAWVARTLPNRPAVPILAGLLVRAEGSTVVLSGSDNETTGQITLPAQ
VDEEGESLVSGKLLADIARSLPAKPVEITADPARMELVCGSARFTLQGLPVEEYPAMPEM
PAATGTVAAEIFARAVAQVVVAAGRDELLPVFTGVRVEIEGDTLSLLATDRYRMALKEIT
WNPAATDLEATALVPAKVLNETARSMTSGEEVTVNLSSGASGDGLVGFEGTGSSGSRRMT
TRLLDGEFPKVRHLMDIKATRSVRVRTDELMAAVRRVALVAERNTSLRMSINEDDIALSA
ATGDQAQASEAIQATVVDHVDGDPTITAAGFNPHYLTDALGALDTPYVDFAFTAPGKPCL
VTGVNDLEGESETDYKHVIMLMRLPS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatccgtctggaacgcgatgtcatggccgacgcggtcgcctgggtggcgcgcacc
cttccgaaccgccccgcggtgccgatcctggcggggctgctggtcagggccgagggctcc
acggtggtcctgtcgggctcagacaatgagacgaccgggcagatcacgctgcccgcccag
gtggacgaggagggcgagtcgctggtctccggcaagctgctcgccgacatcgcccgctcc
ctgcccgccaaacccgtcgagatcaccgccgatcccgcccggatggaactggtctgcgga
tccgcccggttcaccctccaggggctgccggtcgaggagtacccggcgatgcccgagatg
cccgccgccaccggtaccgtcgccgccgagatcttcgccagggcggtcgcccaggttgtg
gtggccgccggacgcgacgagctgctgcccgtcttcaccggcgtccgcgtcgagatcgag
ggcgacaccctctccctgctggccaccgaccggtaccggatggccctcaaggagatcacc
tggaaccctgccgccaccgacctggaggcgaccgcactggtgccggccaaggtgctcaac
gagaccgcccgctccatgacctcgggcgaggaggtcaccgtcaacctgtcgtccggggcc
tccggcgacggactcgtcggcttcgagggcaccggatcctccggcagccgccggatgacc
accaggctgctcgacggggagttccccaaggtgcgccacctcatggacatcaaggccacc
cgatcggtgcgggtgcgcaccgacgaactcatggcagccgtgcgccgcgtcgccctggtg
gccgagcgcaacacctcgctgcgaatgtccatcaacgaggacgacatcgccctgtcggcg
gccaccggagaccaggcgcaggcctccgaggccatccaggccaccgtcgtcgaccacgtc
gacggagaccccacgatcaccgccgcgggattcaacccgcactacctcaccgacgccctc
ggcgccctggacaccccctatgtcgacttcgccttcaccgcccccggcaagccctgcctg
gtcaccggcgtcaacgatctggagggggagtcggagaccgactacaagcacgtgatcatg
ctcatgaggctgccgagctga
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