Paludisphaera borealis: BSF38_02986
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Entry
BSF38_02986 CDS
T04622
Name
(GenBank) putative beta-solenoid-type carbohydrate-active enzyme (GH, PL, or CE) of unknown function
Organism
pbor
Paludisphaera borealis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
Calx-beta
CARDB
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
APW61472
UniProt:
A0A1U7CRB4
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All DBs
Position
3821888..3827644
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AA seq
1918 aa
AA seq
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MVNGYLGQRRKGLAARRRSSSRFNLEALERRELLAVWTVVSNTDTGTASTTDPSKGDLRY
CLTQANTDTNPVIQFSIAGNTTIQLTGPLPAVAKPMLIDATTQGTFAGVPLVEIEGKQIT
AAQSALTITATAGGTTVKGLAFDGSAGTGITIQGNSAGGGDGNTIVGCFFGTSDGVASKP
NLVGLKIFGSSNNTIGGTTQFASNLISGNTTAGLVIGDAGVANGNLVVGNIIGLDVTGKT
SLAPQATGVLVDKSSGTQIQGNLISGNTGDGVWLNNVNGAPTAVTIVGNGVGVDTTLLAG
VANVFNGIHVSGASGVTIGGTAGNSPNLISGNTLNGVLLDPSAGGAATTGVLIQGNRIGT
DLNGAVAIPNNNDGVQTIGTQGVTIGGLTTAARNLISGNKQSGVELANITFGANTIATLI
QGNWIGVNASGTNALPNAVGVNQNGGDATTIGGTAAGAGNLISGNTGQGVRMGTGDHSLV
QGNLIGTNATGTAPLGNGTGLLFANASFATIGGAAAGAGNIISGNGGAGIDSFVIGSQAE
VIQGNWIGVVPGATPTSPVNPLGNGGHGVQIWGPINVLIGGTGPGEGNIIAANGVGALGG
NGINTFGETTGLVVEGNFIGTDRIGTPGLGNGNNGANGGNGVSLFSNGNTIGGTAPGAGN
VIANNSSNGIALVLGSNNNSFLGNSIYNNGQKPVGFTQLGINFGQSNEPLVNQVWPPGPA
NSGPNNFQNYPVLDPSSGIYDNGSIEIKGTLNANVGQTYRVEFFASPTQNVSGFGEGKIF
LGATAVAVTNTTTYTAAFDATLTTSAPIPSGYYITATATDALGNTSEFAKNIVSKQIVDV
SIAGAVASNFPGDPTKVIVGGQLTYTLTITNSSPVAANTVSLVDTLDPNVVYQPLSSSTS
VPGVVLSYNSAGGTVSAVFPTIAAGQTVTVTIVALVAPSAASGPPAPITNAFAITTADVN
SSLNTSGEVDTTNALPAADLRISGFAASPDGVITPLYAGGGYSYSIGVANQAGLSDATNV
VVTDYLPDSTLVTFDPTQNPGWTLHASGTSQYATYDVGTLVSGASQTLTLILGTTAAAVG
PPLSSFATVFSTAVGPVGAVFDPNLANNTSATINTPVTAAADVQVTVVPDPSTVYAGDNL
SYTINVINNGPSPSSGVILTNTVPAGTTFISAEQDGAPLVVTPVDGVLTFNLGGLNAGAS
IKPIVITVGTAGITSSAAVSPTTTANLAWTEFPNASSAADVVVGTVTPKSQLSVALQSDP
SSIYVGGTATYTVTVANTGPSDDTNVTAVLVFPANTIVTLTPGTYTLQQTPTSQIVTFNL
GSLAAGASVQRTIAFTALPAAADSSGSGTVNVSATVTGANYPANTYPPALAGTTVLAAIN
LSIQLSATPNLAQIGQNLVYTIQATNSGPSTATGVVVYNALPAIPQYVTFVSAKSNGVPI
NVAPNANGVLTLPVGTLTAGQSIVFTITVTTTNAAIAASPIFNTAQVVGAEHDTNPDDDQ
KTIGVTVTPAVDLTTTLTAAPSTVEVGDYLTYTTTVLNSGPSNATNLTLIATIPANSTFV
SASPGVTVSNGRLILNISNLAVGGMVGFQYVVSPTSSALTTGTLVSLATAQTSEAIINPS
TSQTSLTIPVIDRYGIIQLASASYTVNEDAGSVAIVVNRVGGSRGTVTVDYATVAVNAVP
GFDFTPVSGTLTFADGVTTQTIVVPILANPYDAHNELFNVVLSNVTPAAALLGSPSTTLV
TIIDTDPNTTPLTVGQATWQGTATTITAIKVTFNQPLAPATAVNPANFLVVGVGPDNRYG
TADDYSIGLTPTYDPSTFTVTLTPWEPIVGNTFYHLTLVGTSGGLVNLGGTSLSGDGATA
GTDNQSSLARGPASSTTPRPATWSPWASAAAGSSTTFWTARIPASSSCSSTMSRGTPR
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacggctacctgggtcaacgtcggaagggcttggcggcgaggcggcggtcgtcg
tcgcggttcaacttggaggcgctggaacgtcgcgagttgctggccgtctggacggtcgtc
agcaacaccgacacggggacggcctcgacaaccgacccgagcaagggggacctgcggtac
tgcctcacgcaggcgaacaccgacaccaatccggtgatccagttctcgatcgcggggaac
acgacgatccagttgaccggtccgttgccggcggtcgccaagccgatgttgatcgacgcc
acgacccaggggacgttcgcgggggtgccgctggtcgagatcgaggggaagcagatcacg
gccgcccagtcggcgctgacgatcacggcgacggccggcggcacgaccgtcaaggggctg
gcgttcgacggcagcgcggggacggggatcacgatccaggggaacagcgccggcggcggc
gacggcaacacgatcgtcggctgcttcttcggcacgtccgacggcgtcgcgtccaagccc
aacctggtgggtctgaaaatcttcggctcgtcgaacaacacgatcggcgggaccacgcag
ttcgccagcaacctgatctcgggcaacaccaccgccggcctcgtcatcggcgacgcgggg
gtcgccaacggcaacctggtggtcggcaacatcatcggcctcgacgtgacgggcaagacc
tcgctggccccccaggcgaccggcgtcctggtcgacaagtcgagcggcacgcagatccag
ggcaacctgatctcgggcaacaccggcgacggcgtctggctgaacaacgtcaacggcgcg
ccgaccgccgtgacgatcgtcggcaacggcgtcggcgtcgacacgacgctgctcgcgggg
gtcgccaacgtcttcaacggcatccacgtcagcggggcttccggggtcaccatcggcggc
acggcggggaactcccccaatttgatctcgggcaatacgctgaacggagtcctcctcgat
cccagcgccggcggcgcggcgaccacgggcgtcttgatccaggggaaccggatcggcacg
gacctgaacggcgcggtcgcgatccccaacaacaatgacggcgtgcagacgatcggcacc
cagggcgtgacgatcggcggcttgacgaccgcggcgcggaacctgatctcgggcaacaag
cagtcgggcgtcgagctggcgaacatcaccttcggcgcgaacacgatcgcgacgttgatc
cagggcaactggatcggcgtcaacgccagcggcacgaacgcgctgccgaacgccgtgggg
gtcaaccagaacggcggcgacgccaccacgatcggcgggacggcggcgggggcgggcaac
ctgatctcgggcaacaccggccagggggtcaggatggggaccggcgatcactcgctggtc
cagggcaacctcatcggcacgaacgcgaccggcacggcaccgctgggcaacggcacgggc
cttctcttcgccaacgcctcgttcgcgacgatcggcggcgcggcggccggcgcggggaac
atcatctcgggcaacggcggcgcggggatcgacagcttcgtcatcggctcgcaggccgag
gtcatccagggcaactggatcggcgtcgtccccggcgcgaccccgacctcgccggtcaac
ccgctgggcaacggcggccacggcgtccagatctggggcccgatcaacgtgctgatcggc
gggaccggccccggcgaggggaacatcatcgcggccaacggcgtgggggcgctcggcggc
aacgggatcaacacgttcggcgagaccaccggcctggtcgtcgagggcaacttcatcggc
accgaccgcatcggcacgccgggcctgggcaacggcaacaacggagccaacggcggcaac
ggcgtcagcttgttcagcaacggcaacacgatcggcggaaccgcccccggcgcgggcaac
gtgatcgccaacaacagctccaacggcatcgcgctggtcctcgggtcgaacaacaattcg
ttcctcggcaactcgatctacaacaacggccagaagccggtcggcttcacgcagctcggg
atcaacttcgggcagagcaacgagccgctggtgaaccaggtctggccccccggccccgcg
aacagcggccccaacaacttccagaactacccggtcctcgacccgtcgagcgggatctac
gacaacgggtcgatcgagatcaaggggacgctgaacgccaacgtcggccagacctaccgc
gtcgagttcttcgcgagcccgacccagaacgtgtcgggcttcggcgagggcaagatcttc
ctgggggcgacagccgtcgccgtcaccaacacgacgacgtacaccgcggcgttcgacgcc
acgctcacgacctccgcgccgatcccgtcgggctactacatcacggccacggcgaccgac
gcgctggggaatacgtcggagttcgccaagaacatcgtctccaagcagatcgtcgacgtc
tcgatcgcgggcgccgtcgcctcgaacttcccgggcgacccgaccaaggtgatcgtcggc
ggccagttgacttacacgttgaccatcaccaattcgagcccggtcgccgccaacacggtg
tcgctggtcgacacgctcgatcccaacgtcgtctaccagccgctgtcgtcctccacgagc
gtcccgggcgtcgtgctctcgtacaactcggccggcggcacggtctccgccgtcttcccg
acgatcgccgcgggccagacggtgacggtcacgatcgtcgcactggtggcgccctcggcc
gcgtccggcccccccgcgccgatcaccaacgcgttcgcgatcacgacggccgacgtgaat
tcgagcctgaacaccagcggcgaggtcgacacgaccaacgccctgcccgcggcggacctg
cggatctcgggtttcgcggcctcgcccgacggcgtgatcacgccgctctacgccggcggc
ggctacagctacagcatcggcgtggcgaatcaggcgggcctctccgacgccaccaacgtc
gtcgtgaccgactacctgcccgactcgaccctcgtcacgttcgacccgacccagaacccg
ggctggacgctgcacgcctcgggaacctcgcaatatgcgacctacgacgtggggaccctg
gtctcgggcgcgtcccagaccttgactctgatcctgggcacgacggccgccgccgtgggg
ccgccgctgagcagcttcgcgacggtgttctcgacggccgtcggcccggtcggcgcggtc
ttcgacccgaatctggccaacaacacgtcggcgacgatcaacacgccggtgacggccgcc
gccgacgtccaggtgacggtcgtcccggacccgagcacggtctacgcgggcgacaacttg
tcgtacacgatcaacgtgatcaacaacggcccctcgccgtcgtcgggggtcatcctgacc
aacacggtgcccgccggcacgacgttcatctcggcggagcaagacggcgcgccgctggtc
gtcacgccggtcgacggcgtgctcaccttcaacctcggcggcctcaacgccggagcgtcg
atcaagccgatcgtgatcacggtcggcaccgccgggatcacctcgtccgccgccgtctcg
ccgacgaccacggcgaacctcgcgtggaccgagttccccaacgcgtcgtcggccgccgac
gtcgtcgtcgggacggtcacgcccaagagccagctctcggtcgccttgcagtcggacccg
tcgagcatctacgtcggcggcacggcgacctacaccgtgaccgtcgccaacaccggcccg
tccgacgacaccaacgtgacggccgtcctggtcttcccggcgaacaccatcgtgacgctc
acgccggggacgtacacgctccagcagaccccgaccagccagatcgtcaccttcaacctg
ggcagcctcgccgccggcgcctcggtgcaacggacgatcgcgttcacggctctgccggcc
gccgccgactccagcggctcggggaccgtcaacgtctcggccacggtcacaggcgccaac
tacccggcgaacacctatccgccggcgctcgcggggacgaccgtcctggcggcgatcaac
ctctcgatccagctctccgccacccccaacctcgcgcagatcggccagaacctggtctac
acgatccaggccaccaatagcggcccgtccacggcgacgggagtcgtcgtctacaacgcc
ctgccggcgatcccgcaatacgtgacgttcgtctcggcgaaatccaacggcgtgccgatc
aacgtcgcccccaacgccaacggcgtcctcaccctgccggtgggaaccctgacggccggg
cagtcgatcgtcttcacgatcaccgtcacgaccaccaacgccgcaatcgccgcctcgccg
atcttcaacaccgcccaggtcgtcggcgccgagcacgacacgaaccccgacgacgatcag
aagaccatcggcgtgaccgtcacgccggcggtcgacctcaccaccacgctcaccgccgcg
ccctcgacggtcgaggtgggggactatctgacctacacgacgaccgtcctgaactccggc
ccctccaacgccaccaacctcacgctcatcgccacgatccccgcgaactcgacgttcgtc
tcggcctcgccgggcgtcacggtctcgaacggccggctgatcctcaatatcagcaacttg
gccgtggggggcatggtgggcttccagtacgtcgtctcgcccacctcgtcggccctcacg
accggcaccctcgtcagcttagccaccgcccagacgtccgaggccatcatcaacccgagc
acgagccagacgtcgctgacgatcccggtcatcgaccgttacggcatcatccagctcgcc
tcggcgtcgtacaccgtcaatgaagacgcgggctcggtcgcgatcgtcgtgaaccgcgtc
ggcgggtcgcgcgggaccgtgaccgtcgattacgcgaccgtcgccgtcaacgccgtgccg
gggttcgacttcacccccgtctcggggaccctgaccttcgccgacggcgtcacgacccag
acgatcgtcgtgccgatcctggcgaacccgtacgacgcccacaacgagctgttcaacgtc
gtgctctcgaacgtgacccccgccgccgcgctgctgggctcgccgagcaccaccctggtg
acgatcatcgacaccgatcccaacaccacgccgctcaccgtcggccaggccacgtggcaa
gggactgcgacgaccatcacggcgatcaaggtgaccttcaaccagccgctcgcgccggcg
accgccgtcaaccccgccaacttcctggtcgtcggcgtcggaccggacaatcggtacggc
acggccgacgactattccatcggcctgacgccgacctacgacccgtcgaccttcacggtc
acgctcaccccgtgggagccgatcgtcggcaacacgttctatcacctgaccctggtgggg
acctcgggcggcctcgtgaacctcggcgggacgtcgctcagcggcgacggcgcgaccgcc
ggcaccgacaaccaatcctccctggcgcggggaccagcctcaagtactacaccgcggccg
gcgacctggtcaccctgggcgtcagcggcggcgggttcctcgacgaccttctggacggct
cgaattccggcgagcagctcgtgctcgtcgaccatgtcgcggggcacaccacgctga
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