Sedimentisphaera salicampi: STSP1_00184
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Entry
STSP1_00184 CDS
T05439
Symbol
yesW
Name
(GenBank) Rhamnogalacturonan endolyase YesW precursor
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pbp
Sedimentisphaera salicampi
Brite
KEGG Orthology (KO) [BR:
pbp00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
STSP1_00184 (yesW)
Enzymes [BR:
pbp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
STSP1_00184 (yesW)
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GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
GH115_C
Laminin_G_3
FG-GAP_3
FG-GAP
fn3
Motif
Other DBs
NCBI-ProteinID:
ARN55818
UniProt:
A0A1W6LJ51
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All DBs
Position
253015..256593
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AA seq
1192 aa
AA seq
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MKISVIKFYLCFLALSSACAYGIGEFVQDKGSEGIISLEAESFTSKAPKSSHSWNLINSP
DCSGNEAMQAQPDDGTSINTGYSATSPSMEFDVYFVKTGTHYVWFRCLPLDGYSDSFHIG
LDGEELASADRARSSNFESWNWSNSTMDGTDASFEVDSTGLHTVNVWMREDGFRVDKILL
TTSPSFTPSGIGPDESIRNYAPSAPEGLSASGINNAVSLVWDENPETDIAGYMVKRSLEP
EGAFEIAASDVKASSYIDNEAENGTTYYYVVSAVDTAGNESADSEPVFAASHVTKRKMEK
LGRGTVAVDIDSGVYVGWRMLGTEPQEVEYNVYRGSEKINSSSISNSTNFIDTSGTQSST
YRIAAVIDGEEKEKSSPVSVWNNFYKDVPLERPSGGTTLDGFDYSYSPNDASVGDLDGDG
EYEIVLKWDPSNSKDNSHSGYTGNVYIDAYEMDGTFLWRVDLGKNIRAGAHYTQFIVYDL
NSDGMAEMICRTADGAKDGQGNVIGDPNADYRNSDGRILSGSEYLTVFDGQTGAALAIED
FEPARGNVSDWGDSYGNRVDRFLAGVAYLDGERPSVIMTRGYYEKTVLAAWDWRGGQLTL
RWIFDSDDPGNSAYAGQGCHSLSIADVDQDSRDEIVFGSCTIDDDGTGLYSTRLGHGDAL
HVADMDPSRPGLEVWECHETSASGATYRDAGTGEIIWEHENTGDVGRALASNIDNREIGY
QLWSFAAGGTYNVDGSQISNSMPSLNFAIWWTGDLQREMLHAADGQGMNPVMEKWNSGDD
YPYRLMNIYGIPDSYSTNANNYTKANPCLTADILGDWREEMIYRSSDNTKLRIFTTTYKT
SHRIYTLMHDSQYRSAVAWQNVGYNQPPHPSFYIGLGMTPPPQPDISVVTPEVKPDELVA
AHWNFDGGTPGAAMNDTGQTGQPSVPDLSGNGYDLYAWNDTYGPAFSQEGQTPSGLGLSC
RLSGGQDAYTTNQGINSWSPEEWTIECAVKLDTLEGWQTFIGRDGSSQGEAESDFYLQKN
GIDNKFRLNFDTAGGQRYILDSDFPAQAGQWYYLAAVSDGSTLKMYADALDGSGSQLAGT
LSMNPENDNSLASAGQNWTIGRGWFDGSQVDHLTGFIDDVRFSSRALEPSEFLHYQCGAW
GYIDSDLNEDCFVDLEDYSFFAQDWGYSLQQLVSFCSEWLENSNPYSELIAE
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattagcgtaatcaaattttatttatgttttttggcattgtcctcagcctgtgct
tacggcataggagaatttgttcaggataaaggctccgagggtattatttccctggaagca
gaaagcttcaccagcaaggcacccaaaagttcacatagctggaatctaataaactcacct
gactgcagcggcaatgaggccatgcaggcccagcctgatgatggaacgagcatcaacacc
ggctattcagcgacaagcccgagtatggagtttgatgtctatttcgttaaaactggaact
cattacgtatggttcaggtgtcttcctttagacggctacagcgattcgttccatatcggt
cttgatggcgaggagcttgcctccgcagacagggcgagaagctcaaattttgaaagctgg
aactggtctaattcaacaatggacggaacagacgcctcttttgaggtggattcaaccggc
ctgcataccgtgaatgtgtggatgagggaggatggatttcgagttgataagatattgcta
accaccagcccctcttttacaccctccggcattggccctgatgaaagcatccgcaactac
gccccctccgctccggaagggctttctgcaagcggaattaacaatgcggtctccctggtg
tgggatgaaaatcctgagaccgatattgcaggctatatggtgaaacgctcgcttgagcct
gaaggcgcattcgagattgcggcttcagatgtgaaggcaagcagctatatagataatgaa
gcggaaaacgggacaacttattattacgttgtctcagcagttgacactgcgggcaatgag
tccgcagacagcgagccggtttttgcagcttcccatgtaactaaacgcaaaatggaaaag
ctcggccgcggtacagtggcggttgatatagacagcggggtatatgtaggctggaggatg
ctgggcacggagccgcaggaagttgaatataacgtttaccgcggctctgaaaagataaac
tcctcctcaatttctaattcgacgaattttatcgacacctcgggcactcagagcagtacg
tacagaattgcagcagtgattgatggtgaggagaaagaaaaatccagcccagtttcagtg
tggaataatttctataaagacgtgcctcttgaaaggccttccggtgggacaactctcgat
ggctttgattattcttacagccccaacgatgcaagcgtgggcgatctcgacggcgacggt
gagtatgagatagttcttaagtgggatccgtccaattccaaggacaactcgcacagcggt
tatacgggaaacgtgtatatcgatgcctatgaaatggacggaacgtttctatggagggtt
gatctgggaaagaatattcgggcaggcgcacattacacccagtttatagtttacgatttg
aacagtgacggaatggctgagatgatatgcagaactgccgacggagcaaaagacgggcag
ggcaatgtgattggcgatccaaacgcagactaccgcaattcagacggcaggatactctcc
ggatctgagtacctcacagtcttcgacggacagacaggagccgctcttgcaatagaggat
ttcgagccggcaaggggaaacgtttcagactggggagattcttacggaaaccgagttgac
cgtttccttgcaggcgttgcatatctggatggcgagagaccgagcgttattatgacccgc
ggctattacgaaaaaactgttctcgctgcctgggactggcggggcgggcagcttaccctc
agatggatcttcgacagcgacgatccgggtaattccgcttacgcaggccaaggctgccac
agcctcagcattgcagacgtggatcaagacagccgagatgagattgtcttcggttcgtgc
acgatagatgatgacggcaccggcctttactccacccgccttggacacggagatgccctt
catgtagcagatatggatccttcacgtccagggctcgaggtatgggagtgtcatgaaaca
tccgcctcaggcgcaacctatcgagacgccggaacgggtgagataatttgggaacacgaa
aacaccggagatgtgggcagagcccttgcttccaacattgacaatcgtgaaatcggttat
cagctctggtctttcgccgccggcggaacatacaacgtggacggctctcaaataagcaac
agtatgccgagcctgaattttgcaatttggtggacaggcgacctccagcgtgaaatgctt
catgccgctgacgggcagggaatgaatccggtgatggagaagtggaacagcggtgatgat
tatccatatcgcttgatgaatatatatggtatccctgattcttacagcacaaacgccaac
aactacaccaaagctaatccctgccttacagcagatatcctcggcgactggcgggaagag
atgatttacaggtcttccgataacacaaagctcagaatcttcactaccacatacaaaacc
agccaccgaatctatacccttatgcacgattcgcagtatcgctcagctgtggcgtggcag
aatgttggctacaatcagcccccgcatccaagcttctacataggcctcgggatgactcct
ccaccccagccggatatatccgtggttactccagaagtcaaacctgatgagttggttgca
gcgcattggaatttcgatggaggcactcccggagctgccatgaacgatactggccagaca
ggtcagccttccgtgcccgatttatccggcaacggctatgatttgtatgcatggaacgat
acctacggcccggcattttcgcaggaaggtcagacgcccagcggtctcggccttagctgc
cggcttagcggcggtcaggacgcctacacaaccaatcagggaatcaacagctggtcgccc
gaagagtggactattgagtgcgcagttaagcttgataccctcgagggatggcaaactttt
ataggcagggacgggtcatctcagggagaggctgagtctgatttctatcttcagaaaaac
ggcatagacaacaaatttcgcttgaatttcgataccgccggcgggcagcgttatattctt
gattctgatttccccgctcaggcaggccagtggtactaccttgcagcggtctccgacgga
agcaccctgaagatgtatgccgatgctcttgatggaagcggttcacagcttgcgggaact
ctctccatgaatcccgaaaacgataactccctcgcatctgcagggcagaactggactata
ggccgcggctggtttgacgggtcgcaggttgaccatctaaccggcttcattgatgatgta
agattttcgagcagagcccttgagccctcagaattcctccattatcagtgcggggcttgg
gggtatatagattccgatttgaacgaggattgtttcgtggatcttgaagattatagcttt
ttcgcacaagattggggttattcactccagcagcttgtctctttctgttcagaatggctg
gaaaacagcaatccatattcggagcttatagctgaataa
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