Sedimentisphaera salicampi: STSP1_00673
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Entry
STSP1_00673 CDS
T05439
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pbp
Sedimentisphaera salicampi
Pathway
pbp00521
Streptomycin biosynthesis
pbp00523
Polyketide sugar unit biosynthesis
pbp00541
O-Antigen nucleotide sugar biosynthesis
pbp01100
Metabolic pathways
pbp01110
Biosynthesis of secondary metabolites
pbp01250
Biosynthesis of nucleotide sugars
Module
pbp_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pbp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
STSP1_00673 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
STSP1_00673 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
STSP1_00673 (rfbC)
Enzymes [BR:
pbp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
STSP1_00673 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
JmjC_2
Ski2_N
VRR_NUC
Motif
Other DBs
NCBI-ProteinID:
ARN56297
UniProt:
A0A1W6LKJ2
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All DBs
Position
complement(922981..923508)
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AA seq
175 aa
AA seq
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MPFEFKKMEIPDVILVTPRVFEDDRGYFMETYKASEFKANGIEEDFVQDNQSFSKRNVIR
GLHFQKKPHAQGKLVRCLQGSIWDVAVDLRENSATYKKWAAAELTSDNKQMLYIPPGFAH
GFATLSDTAIISYKCTAEYCKDADSGIRWNDPEISIAWPVEEPILSQKDFDANKG
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttgagtttaagaaaatggaaattccagatgttatcctcgttacgccgagagtt
ttcgaggacgacaggggctactttatggaaacatacaaggcctccgaattcaaggctaac
ggtattgaagaggattttgtgcaggataatcaatccttttccaagagaaatgttattcgc
gggcttcatttccaaaaaaaaccacatgctcaaggaaagcttgtaagatgcctgcaaggg
tctatttgggatgtagcggttgacctgcgggagaattctgcaacgtacaaaaaatgggct
gctgccgagcttacctcagataacaaacaaatgctctatatcccgcccggctttgcccac
ggctttgcaactctatcagatactgctattatttcatacaaatgcaccgcagagtactgc
aaggatgccgattcaggaatcagatggaatgatccggaaatttcaattgcatggcctgtt
gaggaaccaattttgagtcaaaaggattttgatgcaaacaaaggttaa
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