Sedimentisphaera salicampi: STSP1_00677
Help
Entry
STSP1_00677 CDS
T05439
Symbol
rfbB_1
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pbp
Sedimentisphaera salicampi
Pathway
pbp00521
Streptomycin biosynthesis
pbp00523
Polyketide sugar unit biosynthesis
pbp00525
Acarbose and validamycin biosynthesis
pbp00541
O-Antigen nucleotide sugar biosynthesis
pbp01100
Metabolic pathways
pbp01110
Biosynthesis of secondary metabolites
pbp01250
Biosynthesis of nucleotide sugars
Module
pbp_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pbp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
STSP1_00677 (rfbB_1)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
STSP1_00677 (rfbB_1)
01055 Biosynthesis of vancomycin group antibiotics
STSP1_00677 (rfbB_1)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
STSP1_00677 (rfbB_1)
00525 Acarbose and validamycin biosynthesis
STSP1_00677 (rfbB_1)
Enzymes [BR:
pbp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
STSP1_00677 (rfbB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
Gp_dh_N
Motif
Other DBs
NCBI-ProteinID:
ARN56301
UniProt:
A0A1W6LKJ4
LinkDB
All DBs
Position
complement(925826..926869)
Genome browser
AA seq
347 aa
AA seq
DB search
MNIIVTGGAGFIGSAVIRHIIKNADHSVLNIDKLTYAGNLSSLKEVEGSDRYSFAQADIC
DKPAVQELFSSFKPDAVMHLAAESHVDRSIDGPADFIETNIIGTYNLLDISKKYFEQLQP
DAKSRFRFHHISTDEVYGSLGREGFFKEETSYDPRSPYSASKASSDHLVKAWHHTYQLPI
VLTNCSNNYGPYQFPEKLIPLIILNALEGKPLPVYGKGDNIRDWLYVEDHAEALAKVLLE
GRPGESYNIGGHNEKTNLEVVQTICDLIDEIRPADKPRRELIKFVKDRPGHDKRYAIDAG
KIQSELGWQPKESFETGIRKTIQWYIDNQWWWQPIRDSKYAGERLGE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaacataatagtaacaggtggtgcgggctttataggctcggccgtaataagacatatt
ataaaaaacgccgaccatagcgtgctcaatatcgacaagctcacttacgcgggtaatctt
tcctcgctcaaggaggttgagggttcggatcgctatagctttgctcaggctgatatatgt
gataagccggccgtgcaggagcttttcagctctttcaagcctgatgctgttatgcattta
gctgccgagtctcacgttgaccgctcaatagacggaccggcagatttcattgaaacaaat
ataattggcacatacaacctgctcgatatatccaaaaagtactttgagcagctccagccc
gatgctaagagtcgtttccgttttcatcatatctcaacagatgaggtttacggcagcctt
ggcagagaagggtttttcaaagaagaaacttcttacgaccctcgctctccttattcagcc
agcaaggccagctcagatcatctggttaaagcttggcatcatacttatcagcttccgata
gtgctcacaaactgctccaacaattacggcccatatcagttcccggaaaagcttatcccg
cttataattttgaacgcacttgagggcaagcccctccctgtttacggcaagggtgataat
attcgggactggctttacgtggaagaccatgctgaggctcttgcgaaggtgcttcttgag
ggcaggccgggagaatcctacaatatcggagggcacaacgaaaaaacaaacctcgaggta
gtgcagacaatctgcgatctcattgatgagataaggccggcagataaaccaagacgtgag
cttataaaattcgttaaagaccgcccgggccacgataaacgatacgcaatcgatgcgggc
aaaatacagagcgagctgggctggcagcccaaggaaagcttcgaaaccggcatcagaaaa
acaatacagtggtatatcgataaccagtggtggtggcagccgatcagagattccaaatat
gcaggagaaagactgggggaataa
DBGET
integrated database retrieval system