Paraburkholderia bryophila: NDK50_02390
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Entry
NDK50_02390 CDS
T08797
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
pbry
Paraburkholderia bryophila
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
AC_1
Trypan_PARP
Motif
Other DBs
NCBI-ProteinID:
WCM20345
LinkDB
All DBs
Position
1:complement(524333..527371)
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AA seq
1012 aa
AA seq
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MCHPGHRHAPAHLLEALSSAIGLAVLLPCESAFASCDNVNPVSGQTVTCSGSVPNPSTTS
VTAAAGSTNVTVNVQTGAELDVNGNNVILVRDGSTVTNLGTLNGSGDTFDAISAQGASGG
AGHDVLVNRGSITTSGVESEGMFNGAAAVTMLNDTTGVIRTSGDESAAMHDFQSPGGGTL
TNNGTLATTGASSPGMAALTNNDTLVNNGTITTTGAGSYGVLANGGAVGGPGNNVIVNHG
TIDVSGVNSHGLVSLDTSPGIVTNTGSVVARGAGGLGAYFGGNVTLNNLAGASIVSQQAN
GIVANGGGTFNNAGTISGAINAIALANAGATIDNSGSIVAATSQAISSIGAFNIVIDNTG
TIAGGNGRAISTDSGNDTFNWSGGTVTGSVSLGAGDDTATLTNLTDANLSGVPSFDGGTG
NDLLTFDHTSASGVSRFINWETVNVINGSQLTLDSQGLTLGDSGTLTGTLNVDATSTLFA
GALASAVTIAPAVAGQLVTVNNAGTFDLTNGGANTQAVLVIDGNYTGLNGRLLLQSVLGG
DGSPSGKLVIAQGVGAGSTTLGVTNAGGNGGATLTDGILVVQAVNGATTTASAFTLPKPL
TAGAYTYYLFKGGVSAGTGDNWYLRSSLAAVPSPTPTPTPTPTPTPTPTPTPTPTPTPTP
TPTPTPPPESAAGPIAAPGTPALPAPPPAGAAPTPLYRMEVPVYAAVPVLARELGIAQIG
TFHDRQGEQSLLDESGPLPAAWARVWGEHTSQTSSGGASPDFSGTISGVQVGHDLYADRS
ASGHRNHYGFFLGFSRAQGDVNGFALGFPDLSSGHLAINAYSVGAYWTHIGPSGWYTDAV
VMGSALTLDPMSNQGIGASTHGHAVATSLEAGLPIPLRANLSLEPQMQLIWQHASIDDLD
DGVSNVSFHSANGFVGRLGLRLQGAFEGAGVPWQPYLRVNLWRYFNGTDSVTYAGSTVIP
SNVAATAAEFGLGVVAHLSARGSVFAAASYTTNVNGEHRSSVEGNLGVRWSW
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcatccgggccaccggcacgcgccggctcatttgctcgaagcactgtcgtcggct
atcgggctcgccgttctgttgccttgcgagtccgcgttcgcgagttgcgacaacgtcaat
ccggtcagcggacaaaccgtcacctgcagcggcagcgtaccgaatccttccaccacgagt
gtcaccgccgcagcgggcagcaccaacgtcacggtcaacgtgcagaccggtgcggaactc
gatgtcaatggcaacaatgtcattctcgtgcgcgacggcagcacggtgaccaatctcggc
acgttgaacggcagcggcgataccttcgatgcgatttccgcgcaaggcgcgagcggcggc
gcgggccacgacgtgctggtcaaccgcggcagcatcacgacgagcggcgtcgagtcggaa
ggcatgttcaacggcgccgccgccgtcacgatgctgaacgacaccaccggcgtgattcgc
acgagcggcgacgaatcggcggcgatgcacgatttccagagccccggcggcggcaccctg
accaacaacggcacgctcgccacgaccggcgccagttcgcccggcatggccgcgttgacg
aacaacgacacactcgtcaacaacggcacgatcacgacgaccggcgcgggatcgtatggc
gtgctggcgaatggcggcgccgtcggcggccccggcaacaatgtgatcgtcaaccacgga
acgatcgatgtctccggggtgaattcgcatggcctggtttcactcgatacgtcgcccggt
atcgtgacgaataccggttcggtggttgcacgcggcgccggtggactcggtgcctatttc
ggcggcaacgtcacactgaacaatctggccggcgcgagtatcgtcagccagcaagccaac
ggcatcgtcgccaacggcggcggcacgttcaacaatgccggcacgatctccggcgcaatc
aatgcgatcgctttggccaatgccggcgccacgatcgacaacagcggctcgatcgtcgcg
gcgacgagtcaggcgatcagttccatcggcgcgttcaatatcgtcatcgacaacaccggc
accatcgccggcggcaacggccgcgcgatctcgaccgatagcggtaacgacaccttcaac
tggagcggcggcaccgtcacgggctccgtaagcttgggcgcaggcgacgacaccgccacg
ctcaccaacctcaccgacgcgaatctgagcggcgtgccgagcttcgacggcggcaccggc
aacgatctgctgacgttcgatcacacgtcggcgagcggcgtgagccgctttatcaactgg
gaaacggtcaatgtgatcaacggcagccagttgacgctcgacagtcagggactcacgctc
ggcgacagcggcacgctgactggcacgctcaacgtcgacgcgaccagcaccttgttcgcg
ggtgctctggcgagtgcggtgacgattgcgccggcggtcgcgggacaactcgtcacggtg
aacaatgcaggcacgttcgatctgaccaacggtggcgcgaatacgcaggctgtgctggtg
atcgatggcaactacaccgggctcaatggacggttgctgctgcaaagcgtgctcggcggc
gacggttcaccgagcggcaaactggtgatcgcgcaaggggtcggggcgggcagcacgacg
ctgggcgtgaccaacgccggcggcaacggcggcgccacgctgacggatgggattctcgtc
gtgcaggccgtcaacggcgcaacgaccaccgccagtgcgttcacgctgccgaaaccgttg
acggccggcgcttacacgtactatctgttcaaaggcggtgtgagcgcggggacgggggat
aactggtatttgcgttcgagtttggcggcggtgccttcgccaacgcctacgcctacgcca
acaccgacgcccacacccactccaacaccaacacccactccaacaccgacgccaacaccg
acgccaacacccacaccaccgcccgagtccgccgccggcccaatcgcagcgcccggcaca
cccgccctcccggctccgccccccgcaggcgccgctcccacgccgttgtatcgaatggaa
gtccccgtctacgcagcagtccccgtgctcgcgcgcgaactcggcatcgcgcagatcggc
accttccacgaccgccagggcgaacagtcgctgctcgacgaaagcggcccgctacccgcc
gcatgggcacgcgtctggggcgagcacacttcgcaaaccagcagcggcggcgccagcccc
gacttcagcggcacgatcagcggtgtgcaggtcggccacgatctctacgccgaccgcagc
gcgagcggtcatcgcaaccactacggttttttcctcggcttcagtcgggcgcaaggcgac
gtgaacggtttcgcgctcggctttcccgatctgtcgtccggacatctggcgatcaacgcg
tacagcgtcggcgcgtactggacacacatcggcccgagcggctggtacaccgatgccgtc
gtcatgggcagcgcgctgacgctggacccgatgtcgaatcagggtatcggcgcgagcacg
catgggcacgcggtagcgacgtcgctcgaagccggcctgccgattccgttgcgcgcgaac
ctgagcctcgaaccgcaaatgcaattgatctggcagcacgcatcgatcgacgatctcgac
gatggtgtgtcgaacgtgtcgtttcattcggccaacggcttcgtgggacggctcggtctg
cgtctgcaaggcgcgttcgaaggcgccggcgtgccgtggcaaccgtatttgcgtgtcaat
ctgtggcgctatttcaatggcaccgacagcgtgacttacgcgggcagcacggtgattccg
tcgaatgtcgcggcgacggcggctgaattcggcttgggtgtcgtcgcgcatctgagcgcg
cgcggcagcgtgttcgcggctgcgagttacacgaccaatgtgaatggcgagcaccgcagc
agcgtcgagggcaatctcggcgtgcgctggagctggtga
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