Paraburkholderia bryophila: NDK50_12495
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Entry
NDK50_12495 CDS
T08797
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pbry
Paraburkholderia bryophila
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbry03400
]
NDK50_12495
Enzymes [BR:
pbry01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
NDK50_12495
DNA repair and recombination proteins [BR:
pbry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
NDK50_12495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
DUF3175
aRib
Motif
Other DBs
NCBI-ProteinID:
WCM18289
LinkDB
All DBs
Position
1:complement(2815993..2817561)
Genome browser
AA seq
522 aa
AA seq
DB search
MANLRSLVIVLGDQLDLDASAFDGFDPEQDSVWMAEVVEESTHVWSSKQRTALFLSAMRH
FALSAQEAGRDLVYTRLDAVNNAGSLGAQLQADLLRLRPARLVMTAPGDWRILQAIKSVA
AANATPLDVREDRHFFTSVREFAAHAKGRKSLRMEYFYREQRQRHRVLMGAGGASDEPMG
GRWNFDSLNRESFGAEGPGFVPPRVCFEPDDITREVIALVNTRFAGHPGRLDNFGWPVTR
AHARQSLHTFIEDRLPLFGPYQDALWPDDPWLYHAHISAALNLKLLNPREVVAAAELAYR
NGRASLASVEGFIRQILGWREYVRGIYWTQMPGYAGCNVLDAQHDLPEWYWTGATDFACL
RDALAQTLEHGYANHIQRLMVTGLYALMLGVQPQQVHSWYLAVYVDAVEWVELPNTLGMS
QYADGGMMGSKPYVATGKYIQRMSPHCRNCRYDPAEKAGDRACPFTTLYWDFLIRHQASL
ARNPRMALQVKNLTRLSEAEKQAVSERATAIRRDEVGHVEVA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctaatctgcgctccctcgttatcgtgctgggtgatcagctcgaccttgatgcgtcc
gcgttcgacggattcgacccggaacaggattcggtctggatggctgaagtcgtcgaggag
tcgacgcatgtatggtccagcaagcagcgcacggcgctgttcctgtccgctatgcgccat
ttcgcgctcagtgcgcaggaggcgggccgggacctcgtctacacgcggctcgatgccgtc
aacaacgccggcagtctcggcgctcagctgcaagctgacctccttcggcttcgtcctgct
cggctcgtgatgacggccccaggcgactggcgtattctgcaggcgatcaagtccgttgct
gccgccaacgcaacaccgctagacgtgcgcgaggatcgccacttctttactagtgtgcgt
gagtttgcggcgcatgccaaagggcgcaagtccttgcgcatggagtacttctatcgggag
cagcgtcagcgccatcgggtgctgatgggcgctggcggagcgtctgacgagccgatgggc
ggaaggtggaattttgacagcctcaatcgcgagagcttcggtgccgaggggccaggcttc
gtgccgccgcgcgtctgttttgaacccgacgacattacgcgcgaggtgatcgcattggtt
aatacccggttcgccgggcaccccgggcggctcgataactttggctggcctgtcacacgc
gcccacgcgcggcagtcgctgcacacttttatcgaagaccggctgccgctctttgggccc
taccaggatgctttgtggccagacgatccctggctttaccacgctcacatttctgccgcg
ctcaacctgaagctcctgaacccgcgagaggtggttgcagcggctgaacttgcctatcga
aacgggcgagcttcgctggccagcgttgaaggtttcattcgccaaatccttggctggcgc
gaatacgtgcgcggcatctactggacccagatgccgggttatgccgggtgtaacgtgctg
gatgctcaacacgacctgccagagtggtactggaccggagccacggacttcgcctgtctg
cgcgatgcccttgcgcagacactggaacatggctatgccaaccacatccagcgcctgatg
gtgacgggcctctatgcgctgatgctgggtgtccaaccacagcaagtgcattcctggtac
cttgcagtgtacgttgatgcggtggaatgggtggagctacccaatacactgggcatgagc
cagtatgccgacggcgggatgatgggcagcaaaccttatgtggccaccgggaagtacatc
cagcgcatgagcccccactgcagaaactgccgctacgaccctgccgagaaggctggtgac
cgtgcctgccccttcacaactttgtactgggacttcctgattcgccatcaggcctcgctg
gccagaaatccacgtatggcactgcaggtaaaaaacctgacccgtctgagcgaggccgaa
aagcaggccgttagcgagcgtgcaacggcgatccgccgcgatgaggttgggcatgtcgag
gtggcataa
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