Rubinisphaera brasiliensis: Plabr_4720
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Entry
Plabr_4720 CDS
T01431
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pbs
Rubinisphaera brasiliensis
Pathway
pbs03030
DNA replication
pbs03430
Mismatch repair
pbs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Plabr_4720
03430 Mismatch repair
Plabr_4720
03440 Homologous recombination
Plabr_4720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbs03032
]
Plabr_4720
03400 DNA repair and recombination proteins [BR:
pbs03400
]
Plabr_4720
Enzymes [BR:
pbs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Plabr_4720
DNA replication proteins [BR:
pbs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Plabr_4720
DNA repair and recombination proteins [BR:
pbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Plabr_4720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
AAA_5
AAA_30
TIP49
AAA_14
AAA_19
Mg_chelatase
AAA_16
AAA_18
AAA_28
nSTAND3
TsaE
PIF1
DEAD
Rad17
DUF815
DNA_pol3_delta
Sigma54_activat
RNA_helicase
CCDC53
Motif
Other DBs
NCBI-ProteinID:
ADY62291
UniProt:
F0SQB2
LinkDB
All DBs
Position
complement(5865216..5866997)
Genome browser
AA seq
593 aa
AA seq
DB search
MVEATGTYTVLARRYRPQTFDAVVGQQHVAQALRNAIRAERVAHAYLFTGARGVGKTSMA
RILAKALNCTNSQDGNPCNQCELCQAISTGSDVDVMEIDGASNRGIDDIRSLRANVGIRS
MRTRVKMYIIDEVHMLTKEAFNALLKTLEEPPPNVKFVFCTTEPHKVPDTILSRCQRFDF
SSIETQKISERLAEIAASEGIEVAPEAVDLVARRAGGSMRDSQSLFDQLLAFGGARIEAA
DVNQLLGTAGDQRLLNLIESAHSGQQADLLAEVDQASREGVQLGNLLDQLVNCYRDMMVL
SCGADSLELIGVGPGAKESLQQIGQRIGLQTVMAAMQILSEAKSKLSRVSHGRALVDLAL
IRISMLENLDDLTQLIGDLKSGQMPNLTVAAGPAGNPPPRSAAPAQSPAQPRTSSAPPQQ
QAAPAAPPAPQKKTPEVAPPEPVYQEEEPQPVTQIEFSEANRERLWKQLLGMLETGIVTH
LSKVLRTAISAPNRLDVFFQSTYAFSKSYFEDKPDLIRKIESQLQQLTGQSIVVRFHLDA
TQAPEQETAAAATEAARVSVSRGAAKPAFVESAEEIFSATVARADRIRKAGEG
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggtggaagcaacaggaacctacacagttctggcgcggcggtatcggccgcagacgttc
gacgctgtcgtcggccagcaacatgtggcgcaggcgttgagaaacgctattcgagcagaa
cgcgtggcccatgcgtacctgtttacgggggcccgcggagtcggcaaaacgtcgatggcc
cgtattcttgccaaagcgttgaactgcaccaattcgcaggatggtaacccgtgtaaccaa
tgtgaactgtgtcaggcgatttcgaccggcagcgatgtcgatgtgatggagatcgacggt
gcctccaatcgtggtatcgacgacattcgttcgttgcgtgccaacgtcggcattcgctcg
atgcgcacgcgcgtgaagatgtacatcatcgacgaagtgcacatgctcacgaaagaggct
ttcaacgcgctcttgaagacactcgaagagccgcctccgaatgtgaaattcgtcttctgt
acgaccgagccccacaaggttcccgatacaattctctcccgctgtcagcggttcgatttc
tccagtatcgaaactcagaaaatctctgaacgtctggccgaaattgctgccagcgaaggg
attgaggtcgctccggaagcggttgatctggtggctcgtcgggcaggcggctcgatgcgt
gacagtcagtcgttgtttgaccagttgctcgctttcggcggcgcgcggattgaagcggca
gatgtgaaccagttgctggggaccgctggcgatcagcggctgctgaatctgattgaaagt
gcgcattccggccagcaggccgacctgctcgcggaagtggaccaggcgagcagagaaggg
gtgcagctgggaaacctgctcgatcagctggtgaattgctatcgagacatgatggtcctc
agctgtggtgccgactcgctggagttgattggcgtcggcccgggagcgaaagagtcgctg
cagcagatcggtcagcggatcggtttgcaaaccgtcatggcagccatgcagattctctcc
gaagcgaaatcgaaactctctcgcgtttcgcatgggcgggcgttggtggatctggctttg
atccgcatttcgatgctcgaaaatctggatgatttgacccagctgattggcgacctgaag
tccggccagatgccgaatctgaccgttgctgctggtccggcaggaaatcctccgccaagg
tccgcagctccggctcagtcgccggctcagccgagaacttcgtccgctccgccgcagcaa
caggcggctcccgcagccccgcctgccccgcaaaaaaaaactcctgaggtagctccaccg
gagcctgtctatcaggaggaagagccgcaacctgttacacagatagagtttagcgaggcg
aatcgcgaacggctgtggaaacagctgctgggaatgctcgagacggggattgtgacgcat
ctctcgaaagtgctgcggacagcaatttccgcgccaaatcggctggatgttttctttcaa
tcaacgtatgctttctccaagtcgtatttcgaagacaagccggacctgattcggaagatc
gaatcgcaattgcagcaactgacaggtcagtcgattgttgtgcggttccatctcgacgcc
acgcaggctccggagcaggaaacggctgccgccgcgacggaagctgctcgggtttctgtc
tcgcgcggagctgccaaaccggccttcgtggaatctgcggaagaaatcttctcggctacg
gtggctcgagcggaccggattcgtaaggcgggcgaaggctga
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