Fermentimonas caenicola: ING2E5B_2245
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Entry
ING2E5B_2245 CDS
T03818
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pbt
Fermentimonas caenicola
Pathway
pbt03030
DNA replication
pbt03410
Base excision repair
pbt03420
Nucleotide excision repair
pbt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ING2E5B_2245 (polA)
03410 Base excision repair
ING2E5B_2245 (polA)
03420 Nucleotide excision repair
ING2E5B_2245 (polA)
03440 Homologous recombination
ING2E5B_2245 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbt03032
]
ING2E5B_2245 (polA)
03400 DNA repair and recombination proteins [BR:
pbt03400
]
ING2E5B_2245 (polA)
Enzymes [BR:
pbt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ING2E5B_2245 (polA)
DNA replication proteins [BR:
pbt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ING2E5B_2245 (polA)
DNA repair and recombination proteins [BR:
pbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ING2E5B_2245 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ING2E5B_2245 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_2
HHH_5
DUF3913
Motif
Other DBs
NCBI-ProteinID:
CEA16973
UniProt:
A0A098C3I2
LinkDB
All DBs
Position
chrI:2559854..2562667
Genome browser
AA seq
937 aa
AA seq
DB search
MNKNKLFLLDAYALIYRAYYAFIKFPRIDSKGRNTSAIFGFINTLEEVLNKENPTHIAIG
FDPDGPTFRHLEYESYKAQREATPEVIKASVPYIKEIIKAYNIPILEVPGYEADDVIGTV
AKKMDREQFDVYMMTSDKDYGQLTEPTIFIYRPKYGGNDYEILDDKKVIEKYNIEYPAQV
IDLLGLMGDSSDNIPGCPGIGEKTAVKLLKEFGSIENLLENTDQLKGAQKRNVEENKEQI
LLSKYLATIKTDVPVDIEADELLLREKNEKELMTLFEDLEFRTLLSRVFKQEPSNKTVAP
LQGELFGDSSFSSETVNVTTGILTSKPDNYILSELTDIHSTPHNYITVKTDKEMESLCKS
LLEQKSVCFDTETTGMDPLLSELVGLSFAFKEGEAYYVPISEDQETAQRQVNIFKPFFEN
EEIEKVGQNIKYDILELRNYNVRVKGALFDTMVAHYLLNPELRHGMDYMAETYLNYKTIH
IEDLIGPKGKNQKNMRDVEISIVAEYAAEDADITLKLKNILKEEIKNNNLTTLFYEIECP
LIYVLADMEWTGVRLDLKALEELSCQYSDELKKIEKEIIEMAGVDFNINSPKQIGEVLFD
RLKIVDKPKKTKTGQYKTGEEELEKIRSKHPIISKILEQRGVKKLLTTYIDAFPLLVNPK
TGKVHTSFNQTVAATGRLSSTDPNLQNIPIRDERGKELRRVFIPDDGCLFVSSDYSQIEL
RIMAHLSGDENMIEAFNKGQDIHAATASKIFKIPIEEVDQDMRRKAKTANFGIIYGITPF
GLSERLTIPRTEAKELIDDYFSTFSGVKKYMENSIEKAREHGYVETVYGRKRYLPDISSR
NATVRGFAERNAINAPIQGSAADIIKVAMVRIHKRLEQDNKKSKMIMQVHDELNFNVVPE
ELDYIREMVVEEMENSYHMNVQLKTEIGVGENWLVAH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaacaaacttttcctactcgacgcttatgcgctaatatacagagcctattat
gcatttattaaattcccgaggattgattcaaaaggaaggaatacttctgcaatttttggt
tttataaatacacttgaagaggttctgaataaggaaaatcctacacatattgcaattggt
tttgacccagacggtccaactttccgacatctggaatatgaatcttataaagcccaaaga
gaagctacaccagaagtaattaaagcctcagtcccctatataaaagagataattaaagct
tataatatccctatacttgaagtgccggggtatgaagctgatgatgttattggtactgtt
gcaaagaaaatggacagggagcagtttgatgtgtatatgatgacatcagacaaagactat
ggtcagcttacagaaccaactatttttatatacaggccaaagtatggtggtaatgattac
gaaatacttgatgataaaaaagtcatagaaaagtataatattgaataccctgcccaggtg
attgatctgcttggcttgatgggcgatagttctgataacatacctggttgtcccggtatt
ggagagaaaaccgctgttaagctgcttaaggagtttggatctatagaaaacttgcttgag
aatacagatcaactgaaaggagcgcaaaagcgcaatgttgaagagaacaaggaacagata
ctgttatcaaagtatttggctactatcaaaacagatgtacctgttgatattgaggcggat
gaattacttcttagagaaaaaaacgaaaaggaattgatgactttatttgaagatctggaa
ttccgaactttactttctcgagtttttaaacaggaaccgtcaaataaaacagtagctccc
ttgcagggtgaactatttggcgactcttcattttcttcagaaacagttaatgtaactact
ggtattttaacttcaaaacctgacaattatatattatctgaattaactgatatccactct
accccacacaattacataactgtaaaaacagataaagagatggaatctctatgtaaatca
ttacttgagcagaaatcggtctgttttgatactgagacaacaggaatggatccattgtta
agtgagttagtaggcctttcctttgcttttaaagagggtgaagcatattatgtcccaata
tcagaagatcaggaaacagcccaaagacaggtaaacatattcaaacccttttttgaaaat
gaagagattgaaaaagtaggccagaatataaaatatgatattttggaacttcgtaattat
aatgttagggtaaaaggtgctctctttgacacaatggttgcccactatctgctgaatcct
gaattaaggcatggtatggattatatggcagaaacatatcttaattacaaaacgatacac
attgaagatctgattgggcccaaaggaaagaatcagaagaacatgagagatgtagaaata
tcaatagttgctgaatacgcagcagaggatgctgatataactctgaaacttaagaatata
ctaaaagaggaaattaaaaataataacctcactaccctattttatgaaattgagtgtccg
ttaatctatgtattggcagacatggaatggaccggagtaaggttagaccttaaagcactc
gaggagttatcatgtcaatattccgatgaacttaaaaagattgaaaaggaaattatcgaa
atggcaggtgttgattttaatatcaactcacctaaacagataggtgaagtactttttgac
agacttaagattgtagataaacccaaaaaaacaaaaaccggacaatacaaaacgggcgag
gaagaattagaaaaaatcagatctaaacatccaataatcagcaagatactcgagcagaga
ggggttaaaaaactactaactacctatattgatgcttttccacttcttgttaatcctaaa
actggtaaagttcacacatcgttcaatcagactgttgctgcaacaggcagattaagcagt
acagatccaaatcttcagaatatcccaatcagagatgagagaggaaaggagttaagaaga
gtatttatacctgacgatgggtgcctgtttgtttcttctgactattcacaaattgagtta
aggataatggcacatcttagtggcgatgaaaatatgattgaagcatttaataaaggtcag
gatatacatgctgctactgcctcaaagatatttaaaatccctattgaagaggtagatcag
gatatgcgcagaaaagctaagaccgccaattttggtatcatttatggaataacaccgttt
ggattgtctgaaaggctaactattccacgaactgaagcaaaggagttaatagatgattac
ttttcgactttttccggagtaaaaaaatatatggagaatagcatagagaaagcccgggag
catggatatgttgaaactgtatatggaagaaaaagatatctgcctgatataagttcacga
aatgctacagtcagaggttttgctgaacgcaatgctattaacgcacccatacaaggtagt
gcagctgatattattaaggtagccatggtaaggattcataagcgattagagcaggacaat
aaaaaatcaaagatgattatgcaggtgcatgacgaattaaactttaatgttgtcccagaa
gagcttgattatatcagagagatggttgtagaagagatggagaactcatatcacatgaat
gttcagctaaagacagagattggggtaggagaaaattggctcgtagcacactga
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