Pieris brassicae (large cabbage white): 123709023
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Entry
123709023 CDS
T08632
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123709023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbx03041
]
123709023
Enzymes [BR:
pbx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123709023
Spliceosome [BR:
pbx03041
]
Complex A
U2 snRNP components
U2 related factors
123709023
Complex B
123709023
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
RSRP
Motif
Other DBs
NCBI-GeneID:
123709023
NCBI-ProteinID:
XP_045516062
EnsemblRapid:
ENSPBSG00000008393
LinkDB
All DBs
Position
1:complement(6563509..6576383)
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AA seq
1006 aa
AA seq
DB search
MVRSGRDRDRRRSHSRSVTPERKRRRSRSRSRDRPSKTSKRKRSRSRERDTKRDRSRDRD
RERDRDRDRKRDKREEKSNGSSSKSRKKSPDREKESERLKSKEESLKAESEYDIGSADKE
EEQNRLEAEMQKRRERIERWRAERKRKELESAKKEVQKGSLVTNIQTPTVKKWSLEDDSG
DEGEEDKEAKEKQLAEEKREEDEIDTLDAYMQEVQQEVRKVNQIDHARGIINLPSSDSSV
VILTGTAKKQVTEQKNKGELIEQNQDGLEYSSEEETEDIKDAAANLASKQRKELAKVDHS
SLQYMSFRKAFYTEISELARMTSEEVEAYRTELEGIRVKGKGCPKPIKTWAHCGISKKEM
DILKKLAFEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHVLDQPPLEDTD
GPITLIMSPTRELCMQIGKDIRKFAKSLNLRVVCVYGGTGISEQIAELKRGAEIIVCTPG
RMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMKIIDNIRPDRQTVMFSATFP
RQMEALARRILQKPIEVQVGGRSVVCKEVEQHVAILEEDAKFFKLLELLGLYSHLGSIIV
FVDKQENADSLLKDLMKASYSCMSLHGGIDQFDRDSTIVDFKNGKVKLLVATSVAARGLD
VKQLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAWTFLTPEQGRYAGDVLRAFELAGTN
PTPDLRNLWEKYKEAQEKDGKKVHTGGGFSGKGFKFDESEAQAATERKKYQKAALGLQDS
DDEDVEGDLDQQIETMLAAKKIVKEIKPGVAGATPPAGGPATADGKLELAKRLASRINIA
KGLGVEQKGATQQAAEAILKGSPSTHTLITAKTVAEQLAAKLNTRLNYQPRDEANAEPAE
EVFRKYETELEINDFPQQARWRVTSKEALALISEYSEAGITVRGTYVPTGKAPPEGERKL
YLAIESSQELAVAKAKSEITRLIKEELLKLQTSAHHMVNKARYKVL
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgaagtggtcgtgaccgtgatcgccgtaggtctcacagtcgatctgtgactcca
gaaaggaaaagacggcgttctcggtccagaagccgtgataggccatctaaaacatcaaaa
cggaagcgcagccgcagcagggagagagatacaaaacgcgatcgaagtagagatcgcgat
agggagagagatagagacagagacagaaaaagagataaaagggaagaaaagagtaatggc
tctagtagtaaatctagaaagaaatcaccagatagagaaaaggagagtgagagattaaaa
tcaaaagaggaatccttaaaagctgaatctgaatatgacattggatctgctgataaggaa
gaagaacagaatagactagaggcagaaatgcaaaagcgtcgcgagcgtatagaaaggtgg
cgtgctgaacgaaagaggaaggaattagagtctgccaagaaagaagttcaaaagggcagt
ttagtcaccaatattcagacaccaactgtcaaaaaatggtctttagaagatgactctggt
gatgaaggtgaagaagacaaagaggccaaagagaagcaattggcagaagaaaagagagaa
gaagacgaaattgatactctagatgcatatatgcaagaagttcaacaagaagttcgtaaa
gtgaatcaaatagaccatgctcgtggaatcataaatctgccatcatctgattctagtgta
gttatcctaactgggaccgccaagaaacaagtgacagaacagaaaaacaaaggagagtta
atagaacagaaccaggatggtttggaatattcatctgaagaggaaactgaggatataaaa
gatgcagccgcgaatcttgcgtccaagcaacgtaaggagttagctaaagtggaccattcc
agccttcagtacatgtcatttaggaaagcattttatactgaaattagtgaattggctcga
atgacttcagaagaagtagaagcatacagaacagaattagaaggcatccgagtgaagggc
aagggatgccccaagcctattaagacctgggctcactgtggtattagtaagaaggaaatg
gatattttgaaaaaacttgcatttgaaaaaccaaccccaattcaggcacaggccatacca
gctattatgtccggaagagacttaattggtatagctaaaactggttcaggcaaaacccta
gcttttatattgccaatgttccgacatgttttggaccaaccgcccttggaagacacagat
ggcccaattacccttataatgtcccccacaagagaactttgcatgcagattggcaaagat
ataaggaaatttgcaaaatctttgaacctacgagtcgtttgcgtttatggcggcacggga
atttctgaacagatagcggaattgaaacgtggcgctgaaataatagtgtgcactccaggg
cgtatgatcgacatgttggctgccaactcgggacgcgtcacaaacctacgaagagtcacg
tacatcgtgttagatgaggcggatcggatgtttgatatgggatttgaaccgcaggttatg
aagataatagacaatatccgtccggacagacaaacagtgatgttcagcgcgactttcccc
cgacaaatggaggctctcgctagacggatattgcagaaacctattgaagttcaggtcggt
ggtcgcagtgtagtgtgcaaagaagtagaacagcacgtggcaatattggaagaagatgcg
aaattctttaaacttctagaattattgggactgtacagccatttgggaagtatcatcgtg
ttcgtggataaacaggagaatgctgacagtctacttaaggatcttatgaaggcgtcctat
tcttgtatgagcttgcatggaggtattgatcaattcgacagggattccacgatcgtcgac
ttcaagaatggcaaagtgaagctcctcgtggcgacgagtgtagcggcccggggcttggac
gttaagcaattggttctggttgttaactacgactgtcctaatcactatgaggattatgtt
catagatgtggtcgaactggtcgagctggtaacaaaggttacgcgtggaccttccttacg
ccggaacaagggcgatacgctggggatgtattgcgggctttcgaactcgctggaaccaac
ccaaccccggacttgaggaacctttgggagaaatataaagaggcacaagaaaaggatgga
aagaaagttcataccggcggagggtttagtggaaaaggtttcaaatttgatgagtccgag
gcacaagcggcgacagaaagaaagaaatatcagaaagcagcactcggtcttcaagattct
gatgatgaggatgttgaaggagacctcgatcagcagattgagactatgttagctgctaag
aagattgttaaggaaataaagccgggtgttgcgggtgcaacgccacctgccggtggtcca
gccaccgcggatggcaagctggagttggctaaacgtctggcttcaaggataaacatcgct
aagggccttggcgtagagcaaaagggcgctactcaacaggcggcagaagccattttgaaa
ggatcaccgtctacgcatacacttattaccgcaaaaacagtggcggaacagttagcggcg
aagttaaatacgcgtttgaactaccaacctcgcgatgaagcgaatgcagagcccgcggaa
gaggtattccggaaatacgaaacggagttagaaattaatgacttcccacaacaggccagg
tggagggttactagtaaggaggcgttggcgcttataagcgaatattcagaggcgggtata
acagtgcgagggacctatgtacccacgggtaaagcaccaccagagggcgaaagaaaatta
taccttgctatagaaagctctcaggagttagccgtagctaaagcgaaatctgaaataact
cgacttattaaggaagaactgctcaaactacagacgtccgcgcaccatatggttaataaa
gctagatataaggttctataa
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