Pieris brassicae (large cabbage white): 123715112
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Entry
123715112 CDS
T08632
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03022
Basal transcription factors
pbx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123715112
09124 Replication and repair
03420 Nucleotide excision repair
123715112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbx03021
]
123715112
03400 DNA repair and recombination proteins [BR:
pbx03400
]
123715112
Transcription machinery [BR:
pbx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123715112
DNA repair and recombination proteins [BR:
pbx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123715112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
123715112
NCBI-ProteinID:
XP_045525897
LinkDB
All DBs
Position
10:complement(17003379..17011977)
Genome browser
AA seq
475 aa
AA seq
DB search
MSESSKSKSSNLNATPTLQCKDLHEYLKSRSSQFLETLYNYPTICLAVYRELPELARHFI
IRLLFVEQPVPQAVVASWVTQTHAKEQSKASEALTELSVWHEAPIPGGLPGWLLSQSFKK
NLKIALLGGGRPWSMSQTLEPDGKARDVAFLDAYALERWECVLHYMVGSQQTEGISADAV
RILLHAGLMTRDAEDGSAVITKAGFQFLLLSTAKQVWLFLQHYLHTAEKRNLSSAECLAY
LYQLSFSTLGKDYSTEGMSNNMLMFLQHLREFGLVYQRKRKAGRFYPTRLALNITCVRDG
IAPLEAKRSQGYIVVESNYRLYGYTQSTLQVALLGLFTELMYRFPNLVVGVITRESVRQA
FRGGISAQQIIKFLEQHSHPQMLCAESGGIRTSSLLPPTVVDQIRLWESERNRFTYTEGV
VYNQFLSQADFVVLRDYARAQGVLSWQNERTRTMVVTRPGHDDVKKFWKRYSKSS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatcctcaaaatcgaaatcttctaacttaaatgctacacctaccttacaatgt
aaagatttacacgagtatcttaaaagtcggtcttctcagtttttggagactctctacaat
tatcctacaatttgtttagcagtgtatagagaattgccagaactggcacgacactttata
attcgacttctttttgtcgaacaaccagtcccacaagcagttgtagcttcgtgggtcaca
cagacacatgctaaggaacaaagcaaagcttcagaggcattaacagaactatcagtatgg
catgaggcacctatacctggaggtttaccgggatggttgttatcacagtcatttaagaaa
aatttaaaaattgctcttttgggtggtggccgcccatggagtatgtctcaaaccttggaa
ccggatggcaaagcgagggatgtggcattcttagatgcatatgcacttgagcgatgggaa
tgtgttcttcattacatggtgggcagtcagcaaacagaaggaattagtgctgatgctgta
cggatattgcttcatgctggactcatgactagagatgcggaagatggctcagcggtaata
actaaagcaggctttcagttccttttgctcagtacggctaaacaggtatggttattcctt
caacattatctacacactgcggagaagaggaatctgagttcagcagaatgtttagcttac
ttatatcaactcagctttagtacacttggaaaggactatagtacagaaggtatgagcaac
aatatgctcatgtttttacagcatttgagggagtttggtctcgtttatcagagaaagcgc
aaagctggtcgcttttaccccacgcgtctggcgctgaatataacctgtgttcgagatggt
atagcgccgttggaagccaaaaggtcgcaagggtatatagtcgttgagagtaattatcgc
ctctacgggtatacgcagagcacattgcaagtggctctcttgggactcttcaccgagtta
atgtataggttcccgaacttagtggtcggagtgataactcgtgaatcagtgcgtcaggcg
ttccgaggtggaatctctgcgcaacagatcatcaagtttctggagcagcattcacatcct
cagatgttgtgtgctgaatctggtggtatacggacatcatcacttctcccgccaacagtc
gtggaccagatcagactttgggagagcgagaggaaccgcttcacgtacactgagggtgtg
gtctacaaccagttcctatcacaggctgacttcgtagtgttacgagattatgcgcgtgcg
cagggcgtactaagttggcagaacgagcgcactcgtactatggttgtaacaagaccggga
cacgatgacgtcaagaagttctggaaacgctactccaagtcctcgtag
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integrated database retrieval system
