Syntrophotalea carbinolica: Pcar_1403
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Entry
Pcar_1403 CDS
T00285
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pca
Syntrophotalea carbinolica
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pca03019
]
Pcar_1403 (rnc)
03009 Ribosome biogenesis [BR:
pca03009
]
Pcar_1403 (rnc)
03036 Chromosome and associated proteins [BR:
pca03036
]
Pcar_1403 (rnc)
Enzymes [BR:
pca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Pcar_1403 (rnc)
Messenger RNA biogenesis [BR:
pca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Pcar_1403 (rnc)
Ribosome biogenesis [BR:
pca03009
]
Eukaryotic type
90S particles
RNase
Pcar_1403 (rnc)
Prokaryotic type
rRNA processing factors
Pcar_1403 (rnc)
Chromosome and associated proteins [BR:
pca03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Pcar_1403 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
ABA88649
UniProt:
Q3A4Q8
LinkDB
All DBs
Position
1648653..1649351
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AA seq
232 aa
AA seq
DB search
MLEAKSAALLEDTIDYVFDNQALLLEALTHKSFSNEQNDRTEPDNERLEFLGDAVLGVVV
SHYIFRTFPHLPEGELTRIRSEVVSEKGLTVIGKAICLGDYMRLGKGEERSGGRQKSSLL
ANTMEALLGAVFCDGGFDSVRRVIEALFIPHIQRAARRKTGVDYKTRLQERLQARFGDVP
QYVLIHADGPPHQRSYSVEAHFRGSCIGQGQGRSKKSAEQAAAKQALEYLEE
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgaagctaaaagtgccgcgttgttggaagataccattgattatgtgtttgataac
caggctcttttgctggaagctttgacacataaatctttcagcaacgaacagaacgaccgg
accgagcctgacaacgaaagactcgaattcctcggtgacgcggtgttgggggtggttgtc
agccactacattttccgtacttttccccacctgcccgaaggagaattaacccgtattcgc
tcagaagtcgtcagcgaaaaaggtctgacggttatcggtaaagcgatctgtctgggtgat
tatatgcgtctcggcaaaggggaagagcgcagcggcggtcggcaaaaaagcagcttgctg
gccaataccatggaagcattgcttggtgctgttttttgtgacggcggttttgacagtgtt
cggcgggtcatcgaggccttgttcattccccatattcagcgtgccgcacgtcgcaagaca
ggtgtggattacaaaacccgcttgcaggaacgcctgcaggcaaggttcggagatgtcccc
cagtacgttctgattcatgcggacgggccgccccatcagcgttcctactcggtcgaggcg
catttccggggttcctgtatcggccaggggcaggggcgcagtaaaaagtccgctgaacag
gcagcagccaaacaggcgttggagtatctggaagagtga
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