Syntrophotalea carbinolica: Pcar_2343
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Entry
Pcar_2343 CDS
T00285
Symbol
lpxC
Name
(GenBank) UDP-3-O-(3-hydroxyacyl)-N-acetylglucosamine/UDP-3-N-(3-hydroxyacyl)-2-N-acetylglucosediamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
pca
Syntrophotalea carbinolica
Pathway
pca00540
Lipopolysaccharide biosynthesis
pca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Pcar_2343 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pca01005
]
Pcar_2343 (lpxC)
Enzymes [BR:
pca01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
Pcar_2343 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
pca01005
]
Lipid A
Pcar_2343 (lpxC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Rabaptin
Motif
Other DBs
NCBI-ProteinID:
ABA89582
UniProt:
Q3A225
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All DBs
Position
2740593..2741522
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AA seq
309 aa
AA seq
DB search
MIYQSTLNKPLTISGIGLHTGRQITMILRPAEPDNGIIFHCTDGERRVSIPAVSANVVDT
RLATVIGKDGLSVSTIEHLMAALSACGIDNLHIDIDGPEVPVMDGSAAPFVALLQETGNR
VQEKRRKYLAIRKPITLVDGEKRVSIIPSRFFRITFDIAFDHPCIGLQHRAIKVNTETFR
KEIAPARTFGFLHEVEYLKANGLALGGSLDNAVVIGEEGVLNPDGVRFEDECVRHKILDA
VGDFSLLGHRVLGHVKAYKAGHDINHQMVEKILANADCWQLVESGEAASHGSLSMTGCAA
MAMAGVAEA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgatataccagtcgactctcaataagcccctgaccatttccggaataggactgcatacg
ggacgccagatcaccatgattctgcgacctgcggagcctgataacggcatcatctttcac
tgcacggatggcgaacgccgtgtctccattcctgccgtctccgccaatgtggttgatacc
cgacttgccacagtgatcggcaaagatggcttaagtgtatccaccatagagcaccttatg
gccgccctttccgcctgcggtattgacaacctgcatatcgacattgatggcccggaagtg
cctgtcatggacggcagcgcggctcccttcgttgccctgctgcaggaaaccggcaaccgg
gtacaggaaaagcgccgtaaatacctggctatccgcaaaccgatcaccctggtcgacggg
gaaaaacgtgtaagtatcattccgtcacgttttttccgcattacctttgacattgccttc
gatcatccctgcatcggcttgcagcaccgcgccataaaggtcaatacggaaaccttccgc
aaagagatcgcgccggcccggaccttcggattcctgcacgaagttgagtatctcaaagcc
aacggcttggctctcggtggttccctggacaacgccgttgtcatcggcgaggagggcgtt
ctcaatcctgacggagtgcgctttgaagatgaatgcgtccgccacaagattcttgatgcc
gtaggagatttcagccttcttgggcatcgtgtcctcggccatgtcaaagcctacaaggca
ggacacgatatcaaccaccagatggttgaaaaaatccttgccaatgcggattgctggcaa
ttggttgaatcaggagaggccgcatcccacggcagcctgtctatgaccggttgtgccgcc
atggcgatggccggtgtcgccgaagcctga
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