Syntrophotalea carbinolica: Pcar_3062
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Entry
Pcar_3062 CDS
T00285
Symbol
hemD
Name
(GenBank) uroporphyrinogen III C2,C7-methyltransferase and uroporphyrinogen III synthase
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
pca
Syntrophotalea carbinolica
Pathway
pca00860
Porphyrin metabolism
pca01100
Metabolic pathways
pca01110
Biosynthesis of secondary metabolites
pca01120
Microbial metabolism in diverse environments
pca01240
Biosynthesis of cofactors
Module
pca_M00924
Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Pcar_3062 (hemD)
Enzymes [BR:
pca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
Pcar_3062 (hemD)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
Pcar_3062 (hemD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HEM4
TP_methylase
Adeno_E1B_55K_N
Motif
Other DBs
NCBI-ProteinID:
ABA90297
UniProt:
Q3A010
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Position
complement(3578224..3579765)
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AA seq
513 aa
AA seq
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MNRCENSATGIVYLVGAGPGDPGLLTVRGLQCLRRAEVVVYDYLANPQLLHEAPATAERI
YVGKTAGHHHLPQEKINALLVEKARLGKVVVRLKGGDPCLFGRGGEEACELAEAGLPFEI
VPGVTAGFGAAIYAGIPLTHRDYTTSLGLITGHEDPKKKVSSLDWSKLATGVGTLLFYMG
MGNLATITKKLVQHGRAPDTPVAVVRWGTTPRQQTLVGTLADITERVQQARLGPPAIIVV
GEIVALRKQLRWFDNRPLFGRRILVTRAAGQAGVLTEGLQAAGAEAICCPTLEIVPPPDW
QELDAALQQLPGTDVLVLTSVNAVNYFFERLFALGHDSRLLHDVCIAAVGPKTAAALRQY
GLRADLLPDEQRAEGVLEVLLDRGVTGKRILYPRSQRARDLLVTELSAAGAEVCAPVAYH
TRAAVGAAEQLREALEQGVDAVTFASSSAVDHCLQALGDDGQRLLAGVTIASLGPLTSDT
VRRHGLEVAVEAAVPTVEMLIEALQGYFGELEA
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgttgcgaaaacagcgccacaggcatcgtttatctggtcggagccggtcccggc
gatcccggcttgctgaccgtgcggggattgcagtgcctgcgccgtgccgaagtcgtggtc
tacgattacctggccaatccgcagctgctgcatgaggcaccggccacggccgaacgcatc
tatgtcggcaaaacggctggccaccatcacctgcctcaggagaagatcaacgcgctgctg
gtcgaaaaagcgcgtctgggcaaggtggtggtgcgtctcaaggggggtgatccctgtctt
ttcggtcggggcggcgaagaggcctgcgaactggccgaagcgggtttgcctttcgagatc
gtgccgggtgtcaccgccggtttcggcgccgccatctatgccgggattcccttgacccat
cgtgattacaccaccagtctgggtttgatcaccggccatgaagatccgaaaaagaaggtg
tcgagtctcgactggtcgaaactggccaccggggtcggtaccctgctgttttacatgggc
atgggcaatctggccaccatcaccaaaaagcttgtgcaacacggtcgcgcgcccgacact
ccggtggccgtggtacgctggggcaccaccccgcggcagcagaccttggtcggcacgctg
gccgatatcaccgaacgcgtgcagcaggcccgcctgggcccgccggccatcatcgtggtc
ggtgaaatcgtggcactgcgcaagcagttgcgttggttcgacaaccggccgctgttcggg
cggcgcattctggtgacccgggccgccggccaggccggtgtcctgaccgagggcttgcag
gccgccggggccgaggccatctgctgtccgaccctggagatcgtgccgcctcccgactgg
caggagctggatgccgccttgcagcagctgcccggtaccgatgtattggtgctgacctcc
gttaatgcggtaaactatttcttcgaacggttgtttgccctggggcacgacagtcgcctt
cttcatgatgtttgtatcgccgcggtgggccccaaaaccgctgccgctcttcggcagtat
ggcctgcgcgccgatctgctgcccgatgagcaacgcgccgaaggggtgctggaggtgctt
cttgacaggggcgtgaccggcaagcgcattctctacccccgtagccaacgggcccgcgat
ctgttggttacggaactgtccgctgccggtgccgaggtctgtgccccggtggcctatcat
acccgtgccgccgtcggtgctgccgagcagctgcgtgaagccctcgagcagggtgtcgat
gccgtgacctttgcctcgtcctcggcggtggatcattgcctgcaggctcttggcgatgac
ggtcagcggctgctggcaggggtgacgatcgccagcctcggccctctgaccagtgacacc
gtccgccgacacggtctggaggttgccgtggaggctgcggtgccgacggtggagatgctg
attgaggctttgcaggggtattttggcgagctggaggcatag
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