Pseudomonas cannabina pv. alisalensis: JGS08_00170
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Entry
JGS08_00170 CDS
T07379
Symbol
rph
Name
(GenBank) ribonuclease PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcab03016
]
JGS08_00170 (rph)
Enzymes [BR:
pcab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
JGS08_00170 (rph)
Transfer RNA biogenesis [BR:
pcab03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
JGS08_00170 (rph)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
QQN22194
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All DBs
Position
complement(33280..34002)
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AA seq
240 aa
AA seq
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MKRPSGRAADQLRSIRITRNYTKHAEGSVLVEFGDTKVICTVSVENGVPRFLKGQGQGWL
TAEYGMLPRATGERNQREASRGKQGGRTLEIQRLIGRSLRAALDMSKLGDVTLYVDCDVI
QADGGTRTASITGAMVALADALKVIKKRGGLKGGDPLKQMIAAVSVGMYQGEPVLDLDYL
EDSAAETDLNVVMTSAGGFIEVQGTAEGAPFQPEELNAMLALAQKGMTELFELQRAALAD
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtccaagtggtcgcgccgccgatcagctccgctcgatccgcatcacccgcaac
tacaccaaacacgccgagggttctgtactggtcgagtttggtgataccaaggtgatctgc
accgtcagcgtcgaaaacggcgtaccacgcttcctcaagggccagggccagggctggttg
accgccgagtacggcatgttgccgcgtgctaccggcgagcgtaaccagcgtgaagccagc
cgtggcaagcagggcggccgcaccctcgagatccagcgcctgatcggtcgttcgctgcgc
gctgcactcgacatgtccaaattgggcgacgtcaccctgtatgttgattgcgatgtcatt
caggctgacggcggcactcgcaccgcgtccattaccggcgctatggttgcactggctgac
gcgctgaaggtgatcaagaagcgtggcggcctgaaaggcggcgacccgctcaagcagatg
attgcggcggtttccgtcggcatgtatcaaggtgaaccagtgctcgacctggactacctt
gaagactcagccgccgaaaccgacctgaacgtggtgatgaccagtgccggcggcttcatc
gaagtacagggcactgccgaaggcgcgccgttccagcccgaagagctgaatgcgatgctg
gcgctggcccagaaaggcatgaccgaattgttcgaactgcagcgtgccgcattggccgac
tga
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