Pseudomonas cannabina pv. alisalensis: JGS08_00230
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Entry
JGS08_00230 CDS
T07379
Name
(GenBank) hydrogen peroxide-inducible genes activator
KO
K04761
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcab03000
]
JGS08_00230
Transcription factors [BR:
pcab03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JGS08_00230
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
Motif
Other DBs
NCBI-ProteinID:
QQN22205
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Position
43904..44827
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AA seq
307 aa
AA seq
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MTLTELRYIVTLAQEQHFGHAAERCHVSQPTLSVGVKKLEDELGVLIFERSKSAVRLTPV
GEGIVAQAQKVLEQAQGIRELAQAGKNQLTAPLKVGAIYTVGPYLFPHLIPQLHRVAPQM
PLYIEENFTHVLRDKLRNGELDAVIIALPFNEADVLTLPLYDEPFSVLMPAGHPWTKKET
IDAAALNDKSLLLLGEGHCFRDQVLEACPTLGKGNEGAKHTTVESSSLETIRHMVASGLG
ISILPLSAVDSHHYAPGVIEVRPLTPPVPFRTVAIAWRASFPRPKAIEILADSARLCSVA
RPKTEAS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgacccttacagaattgcgctacatcgttacgctcgcccaagagcaacactttggccac
gctgccgagcgctgccacgtcagccagccaacgttgtcggtgggtgtcaagaaactcgaa
gacgaactcggtgtgctgattttcgagcgcagcaagagcgctgtgcgcctgacaccggta
ggcgaagggatcgtggcccaggcccagaaggtgctggagcaggctcagggcattcgcgaa
ctggcccaggctggcaagaatcagctgaccgcgccgctgaaagtcggcgcgatctacacc
gtcggtccttatctgtttccgcacttgatcccgcaactgcaccgggtcgccccgcagatg
ccgttgtacatcgaagaaaacttcactcacgtattgcgcgacaagctgcgtaatggcgag
ctggacgcagtgatcattgccttgccgttcaacgaagcggacgtactgaccctgccgctt
tacgatgagccgttttccgtgctgatgccggctggtcacccgtggactaagaaagagacc
atcgacgctgccgcgctaaacgacaaaagcctgctgttgctgggcgaaggccactgcttc
cgtgatcaggttctggaagcctgcccgacgctgggcaaaggcaacgaaggtgcgaagcac
acgacggtcgagtccagctcgctggaaaccattcgccacatggtcgcttcgggattgggc
atttcgatcctgccgctgtcggcagtcgacagtcatcactatgctcccggcgtgatcgaa
gtccgcccgctgacgccgccagtgccgttccgtacggtcgccatcgcttggcgtgcaagc
tttccgcggccgaaagccatcgagatcctcgctgactccgcacgcctgtgctcagtggct
cgtccgaaaacagaagcgagctag
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