Pseudomonas cannabina pv. alisalensis: JGS08_03125
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Entry
JGS08_03125 CDS
T07379
Name
(GenBank) type III effector
Organism
pcab
Pseudomonas cannabina pv. alisalensis
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NCBI-ProteinID:
QQN24580
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Position
664160..665533
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AA seq
457 aa
AA seq
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MRSVSTTSCRDLQAITDYLKHHVFAAHRFSVIGSPDERDAALAHNEQIDALVETRANRLY
SEGETPATIAETFAKAEKFDRLATTASSAFENTPFAAASVLQYMQPAINKGDWLATPLKP
LTPLISGALSGAMDQVGTKMMDRARGDLHYLSTSPDKLHDAMAVSVKRHSPALGRQVVDM
GIAVQTFSALNVVRTVLAPALASRPSVQGAVDFGVSTAGGLVANAGFGDRMLSVQSRDQL
RGGAFVLGMKDKEPKAALSEETDWLDAYKAIKSASYSGAALNAGKRMAGLPLDVATDGLK
AVRSLVSATSLTKNGLALAGGYAGVSKLQKMATKNITDSATKAAVSQLSNLVGSVGVFAG
WTTAGLATDPAVKKAESFIQDKVKSTASSTTSYVADQTVKLAKTVKDMSGEAISSTGASL
RSTVNNLRHRSAPEADIEEGGISAFSRSETPFQLRRL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgcggtctgtcagcactacctcgtgccgcgatctacaagctattaccgattatctgaaa
catcacgtgttcgctgcgcacaggttttcggtaataggctcaccggatgagcgtgatgcc
gctcttgcacacaacgagcagatcgatgcgttggtagagacacgcgccaaccgcctgtac
tccgaaggggagacccccgcaaccatcgccgaaacattcgccaaggcggaaaagttcgac
cgtttggcgacgaccgcatcaagtgcttttgagaacacgccatttgccgctgcctcggtg
cttcagtacatgcagcctgcgatcaacaagggcgattggctagcaacgccgctcaagccg
ctgaccccgctcatttccggagcgctgtcgggagccatggaccaggtgggcaccaaaatg
atggatcgtgcgaggggtgatctgcattacctgagcacttcgccggacaagttgcatgat
gcgatggccgtatcggtgaagcgccactcgcctgcgcttggtcgacaggttgtggacatg
gggattgcagtgcagacgttctcggcgctaaatgtggtgcgtaccgtattggctccagca
ctagcgtccagaccgtcggtgcagggtgctgttgattttggcgtatctacggcgggtggc
ttggttgcgaatgcaggctttggcgaccgcatgctcagtgtgcaatcgcgcgatcaactg
cgtgggggggcattcgtacttggcatgaaagataaagagcccaaggccgcgttgagtgaa
gaaactgattggcttgatgcttacaaagcgatcaagtcggccagctactcaggtgcggcg
ctcaatgcgggcaagcggatggccggcctgccactggacgtcgcgaccgacgggctcaag
gcggtgagaagtctggtgtcggccaccagcctgacaaaaaatggcctggccctagccggt
ggttacgccggggtaagtaagttgcagaaaatggcgacgaaaaatatcactgattcggcg
accaaggctgcggttagtcagctgagcaacctggtgggttcggtaggcgttttcgcaggc
tggaccaccgctggactggcgactgaccctgcggttaagaaagccgagtcgtttatacag
gataaggtgaaatcgaccgcatctagtaccacaagctatgttgccgaccagaccgtcaaa
ctggcgaaaacagtcaaggacatgagcggggaggcgatctccagcaccggtgccagctta
cgcagtactgtcaataacctgcgtcatcgctccgctccggaagctgatatcgaagaaggt
gggatttcggcgttttctcgaagtgaaacaccgtttcagctcaggcgtttgtaa
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