Pseudomonas cannabina pv. alisalensis: JGS08_05070
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Entry
JGS08_05070 CDS
T07379
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00521
Streptomycin biosynthesis
pcab00523
Polyketide sugar unit biosynthesis
pcab00541
O-Antigen nucleotide sugar biosynthesis
pcab01100
Metabolic pathways
pcab01110
Biosynthesis of secondary metabolites
pcab01250
Biosynthesis of nucleotide sugars
Module
pcab_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
JGS08_05070 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JGS08_05070 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JGS08_05070 (rfbC)
Enzymes [BR:
pcab01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
JGS08_05070 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QQN23047
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Position
complement(1131031..1131576)
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AA seq
181 aa
AA seq
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MNATRLAIPDVIVFEPKTFGDDRGFFFESFNQKAFEEVVGRSVKFVQDNHSRSVKGVLRG
LHYQIQQPQGKLVRVTAGEVFDVAVDLRKSSPTFGKWVGLHLTAENKKQLWIPEGFAHGF
VVLSESAEFLYKTTDYWAPEHERSLAWNDPTVNIEWPLSDAPSLSVKDQKAVTFEDAEVF
A
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaacacgcctcgccattccagacgtcatcgtattcgagcctaaaaccttcggt
gatgatcgcgggtttttctttgaaagcttcaaccagaaggcattcgaagaggtcgttggc
cgatcggtcaaatttgtccaggataaccactctcgctctgttaaaggcgttcttcgcggt
ttgcattatcaaattcagcagccgcagggcaagcttgtgagagtgaccgcaggcgaagta
ttcgatgttgccgtcgatctgcgcaaaagctcaccgacattcggcaaatgggtgggcctg
cacctcaccgccgaaaacaaaaaacagctgtggattccggaaggctttgctcacggtttc
gtcgtgttgtccgaaagtgccgagtttctttataaaaccactgattactgggctccggaa
catgaacgcagcctcgcctggaacgatccaacggtgaacatcgagtggccgctcagcgac
gcgccttccctgtcagttaaagaccagaaagccgtcaccttcgaagatgccgaggtgttc
gcttaa
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