KEGG   Pseudomonas cannabina pv. alisalensis: JGS08_05070
Entry
JGS08_05070       CDS       T07379                                 
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
  KO
K01790  dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
Organism
pcab  Pseudomonas cannabina pv. alisalensis
Pathway
pcab00521  Streptomycin biosynthesis
pcab00523  Polyketide sugar unit biosynthesis
pcab00541  O-Antigen nucleotide sugar biosynthesis
pcab01100  Metabolic pathways
pcab01110  Biosynthesis of secondary metabolites
pcab01250  Biosynthesis of nucleotide sugars
Module
pcab_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:pcab00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    JGS08_05070 (rfbC)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    JGS08_05070 (rfbC)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    JGS08_05070 (rfbC)
Enzymes [BR:pcab01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.13  dTDP-4-dehydrorhamnose 3,5-epimerase
     JGS08_05070 (rfbC)
SSDB
Motif
Pfam: dTDP_sugar_isom
Other DBs
NCBI-ProteinID: QQN23047
LinkDB
Position
complement(1131031..1131576)
AA seq 181 aa
MNATRLAIPDVIVFEPKTFGDDRGFFFESFNQKAFEEVVGRSVKFVQDNHSRSVKGVLRG
LHYQIQQPQGKLVRVTAGEVFDVAVDLRKSSPTFGKWVGLHLTAENKKQLWIPEGFAHGF
VVLSESAEFLYKTTDYWAPEHERSLAWNDPTVNIEWPLSDAPSLSVKDQKAVTFEDAEVF
A
NT seq 546 nt   +upstreamnt  +downstreamnt
atgaatgcaacacgcctcgccattccagacgtcatcgtattcgagcctaaaaccttcggt
gatgatcgcgggtttttctttgaaagcttcaaccagaaggcattcgaagaggtcgttggc
cgatcggtcaaatttgtccaggataaccactctcgctctgttaaaggcgttcttcgcggt
ttgcattatcaaattcagcagccgcagggcaagcttgtgagagtgaccgcaggcgaagta
ttcgatgttgccgtcgatctgcgcaaaagctcaccgacattcggcaaatgggtgggcctg
cacctcaccgccgaaaacaaaaaacagctgtggattccggaaggctttgctcacggtttc
gtcgtgttgtccgaaagtgccgagtttctttataaaaccactgattactgggctccggaa
catgaacgcagcctcgcctggaacgatccaacggtgaacatcgagtggccgctcagcgac
gcgccttccctgtcagttaaagaccagaaagccgtcaccttcgaagatgccgaggtgttc
gcttaa

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